RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 GRINAQ7Z429 371 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SIRT6Q8N6T7 355 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF441Q8N8Z8 693 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MDS2Q8NDY4 140 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CATSPER1Q8NEC5 780 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ARID1BQ8NFD5 2236 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR2M7Q8NG81 312 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PHOSPHO1Q8TCT1 267 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CA5BP1Q8WTZ4 195 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TMEM131Q92545 1883 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CCDC120Q96HB5 630 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CLUHP3Q96NS8 147 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CSF3RQ99062 836 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 YIPF4Q9BSR8 244 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 POTEKPQ9BYX7 375 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 C1orf21Q9H246 121 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CALHM2Q9HA72 323 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ACER3Q9NUN7 267 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CCDC167Q9P0B6 97 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF225Q9UK10 706 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 EXO1Q9UQ84 846 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TDRD6O60522 2096 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ATP6AP2A0A1C7CYW4 349 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ELOVL7A1L3X0 281 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 E9PLN8 166 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FAM227AF5H4B4 570 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 WWP2O00308 870 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TSPAN4O14817 238 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SLC22A1O15245 554 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ATP6AP2O75787 350 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SCO1O75880 301 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ETHE1O95571 254 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CBX7O95931 251 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 IGF2P01344 180 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 IL2RAP01589 272 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 APOC1P02654 83 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 HMGN2P05204 90 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 HPNP05981 417 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 POU3F2P20265 443 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 DPP4P27487 766 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RRM2P31350 389 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CD96P40200 585 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RBM34P42696 430 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR3A3P47888 321 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ENTPD1P49961 510 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 POLR2HP52434 150 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CTBP2P56545 445 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RGS8P57771 180 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FBXW4P57775 412 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ACTR3P61158 418 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 DBPQ10586 325 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MADCAM1Q13477 382 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ALKBH1Q13686 389 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 PDK3Q15120 406 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 INPP5JQ15735 1006 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RGS21Q2M5E4 152 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 GFOD2Q3B7J2 385 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 C4orf17Q53FE4 359 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SHISA6Q6ZSJ9 500 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 LHFPL2Q6ZUX7 228 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 LANCL3Q6ZV70 420 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ESPNLQ6ZVH7 1005 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 THNSL2Q86YJ6 484 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 APCDD1LQ8NCL9 501 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR2T12Q8NG77 320 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR52E4Q8NGH9 312 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CHPT1Q8WUD6 406 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 GEMIN6Q8WXD5 167 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FIG4Q92562 907 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FBXW5Q969U6 566 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 CPNE4Q96A23 557 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FAM162AQ96A26 154 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 C8orf44Q96CB5 159 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 MRPL48Q96GC5 212 aaKnown RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 NSMCE2Q96MF7 247 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR7D2Q96RA2 312 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 KCTD14Q9BQ13 255 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 VKORC1Q9BQB6 163 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ASPNQ9BXN1 380 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF350Q9GZX5 532 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SAP130Q9H0E3 1048 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 OR51I1Q9H343 314 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF395Q9H8N7 513 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TBC1D23Q9NUY8 699 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ASH2LQ9UBL3 628 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 RNF24Q9Y225 148 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SLC5A6Q9Y289 635 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ASB1Q9Y576 335 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ADAMTS9Q9P2N4 1935 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 KNL1Q8NG31 2342 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TNRC18O15417 2968 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TP53BP1Q12888 1972 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 A0A1W2PNU3 283 aaPredicted RBP3.27□□□□□ -1.89
PTPN22-211ENST00000538253 FAM172BPA6NC97 362 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 UPK1AO00322 258 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF208O43345 1280 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 SUV39H1O43463 412 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 KIAA0513O60268 411 aa3.27□□□□□ -1.89
PTPN22-211ENST00000538253 TSPAN2O60636 221 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms