RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	MAPKAP1	Q9BPZ7	522 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	SRXN1	Q9BYN0	137 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	RAB34	Q9BZG1	259 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	VCPKMT	Q9H867	229 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	FN3KRP	Q9HA64	309 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	SGK2	Q9HBY8	427 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	MCCC2	Q9HCC0	563 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	HYPK	Q9NX55	129 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	SEC14L3	Q9UDX4	400 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	MOK	Q9UQ07	419 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	PIGL	Q9Y2B2	252 aa		4	□□□□□ -1.77
PRKDC-208	ENST00000536710	TIMM8A	O60220	97 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	ECI2	O75521	394 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	LYPLA1	O75608	230 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	SERPINA3	P01011	423 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	RBMY1C	P0DJD4	496 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	NCF2	P19878	526 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	KLK2	P20151	261 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	PSMB1	P20618	241 aa	Known RBP	3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	DIO3	P55073	304 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	BID	P55957	195 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	SEC61G	P60059	68 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	SLC15A2	Q16348	729 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	KCTD21	Q4G0X4	260 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	LCE1F	Q5T754	118 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710		Q6ZR54	194 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	SVOPL	Q8N434	492 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	OR9A1P	Q8NGU1	263 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	HTR3C	Q8WXA8	447 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	ST8SIA1	Q92185	356 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	C10orf35	Q96D05	121 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	TBX15	Q96SF7	602 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	ZNF670	Q9BS34	389 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	RNF126	Q9BV68	326 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	BFAR	Q9NZS9	450 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	PNPLA6	Q8IY17	1366 aa		3.99	□□□□□ -1.77
PRKDC-208	ENST00000536710	TTC21B	Q7Z4L5	1316 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	IGHV1OR15-1	A0A075B7D0	117 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	IGHV7-81	A0A0B4J1V7	117 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	IQANK1	A0A1B0GTG1	560 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	BTBD17	A6NE02	478 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710		A8MXQ7	604 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	IDS	B3KWA1	339 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	GOLGA8S	H3BPF8	625 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	UBXN8	O00124	270 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	NBR2	O15453	112 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	ZNF264	O43296	627 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	FCMR	O60667	390 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	CAPN1	P07384	714 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	COX5A	P20674	150 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	CCR1	P32246	355 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	MAP3K8	P41279	467 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	SULT1E1	P49888	294 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	HLCS	P50747	726 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	IGLV3-21	P80748	117 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	ARL6IP1	Q15041	203 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	KYAT1	Q16773	422 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	KLHL38	Q2WGJ6	581 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	SPINK14	Q6IE38	97 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	ACOT7L	Q6ZUV0	252 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	TMEM179B	Q7Z7N9	219 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	CATSPER1	Q8NEC5	780 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	MARC2	Q969Z3	335 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	CXorf40B	Q96DE9	158 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	PGLYRP4	Q96LB8	373 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	RNF2	Q99496	336 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	ZNF184	Q99676	751 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	TCHP	Q9BT92	498 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	PARD6B	Q9BYG5	372 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	RBKS	Q9H477	322 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	ZNF702P	Q9H963	129 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	TNFRSF19	Q9NS68	423 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	VNN3	Q9NY84	501 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	ONECUT1	Q9UBC0	465 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	HCFC1	P51610	2035 aa		3.98	□□□□□ -1.77
PRKDC-208	ENST00000536710	IGLV3-10	A0A075B6K4	115 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	ARHGEF35	A5YM69	484 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	HELT	A6NFD8	242 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	SNTN	A6NMZ2	147 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	ERI2	A8K979	691 aa	Known RBP	3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710		K7N7A8	449 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	ATP6V1B2	P21281	511 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	AQP1	P29972	269 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	HNRNPA3	P51991	378 aa	Known RBP	3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	KLRB1	Q12918	225 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	OR2A2	Q6IF42	318 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	UQCC3	Q6UW78	93 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	HSDL2	Q6YN16	418 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	DHDDS	Q86SQ9	333 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	C17orf82	Q86X59	251 aa	Predicted RBP	3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	ZNF100	Q8IYN0	542 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	UBE2J2	Q8N2K1	259 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	TMEM252	Q8N6L7	170 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	LINC00612	Q8N6U2	182 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	OR1L4	Q8NGR5	311 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	FGF11	Q92914	225 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	UBE2E3	Q969T4	207 aa		3.97	□□□□□ -1.77
PRKDC-208	ENST00000536710	SEC22A	Q96IW7	307 aa		3.97	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms