RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MAKP20794 623 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 HAAOP46952 286 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 VBP1P61758 197 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 FOXK2Q01167 660 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 STX4Q12846 297 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 FLYWCH1Q4VC44 716 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 ACSM5Q6NUN0 579 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 ATG4DQ86TL0 474 aaPredicted RBP7.33□□□□□ -1.24
COL21A1-212ENST00000535941 LAPTM4BQ86VI4 370 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF440Q8IYI8 595 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 TMEM163Q8TC26 289 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 GPR151Q8TDV0 419 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 KISS1RQ969F8 398 aaPredicted RBP7.33□□□□□ -1.24
COL21A1-212ENST00000535941 ART5Q96L15 291 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 LMF1Q96S06 567 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 TIMP4Q99727 224 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 AASSQ9UDR5 926 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 TPRKBQ9Y3C4 175 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 CDH10Q9Y6N8 788 aa7.33□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF318Q5VUA4 2279 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 A0A087WUJ7 227 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 CPSF4LA6NMK7 179 aaKnown RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 ALG1L2C9J202 215 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 PRKYO43930 277 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 PRKNO60260 465 aaPredicted RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 OR10H2O60403 315 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 OR7A10O76100 309 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 IGHA1P01876 353 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 MT-ND2P03891 347 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 GAAP10253 952 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SPNP16150 400 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 AVPR2P30518 371 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 UQCRC1P31930 480 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 PTGDSP41222 190 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 GIPRP48546 466 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 PNLIPRP2P54317 469 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 B2MP61769 119 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 PIGFQ07326 219 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SYT14P1Q58G82 188 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 CLVS2Q5SYC1 327 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 LINC00299Q6ZSB3 139 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 HMGN2P46Q86SG4 172 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 EID2Q8N6I1 236 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 CELF2-AS1Q8N7Q2 184 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 OR8J1Q8NGP2 316 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 OR6F1Q8NGZ6 308 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 FCGR1BQ92637 280 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 PIGKQ92643 395 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 RBM18Q96H35 190 aaKnown RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 HS6ST2Q96MM7 605 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 TMEM43Q9BTV4 400 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 LAT2Q9GZY6 243 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 RACGAP1Q9H0H5 632 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 NXF5Q9H1B4 397 aaKnown RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 DSN1Q9H410 356 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 Q9N2J8 555 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 RXFP3Q9NSD7 469 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 C20orf141Q9NUB4 165 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 OCIAD1Q9NX40 245 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 CLCA2Q9UQC9 943 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SIGLEC7Q9Y286 467 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 GALR2O43603 387 aaPredicted RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 YES1P07947 543 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 GTF2E2P29084 291 aaKnown RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 DUSP3P51452 185 aaPredicted RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 TAS2R41P59536 307 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 IL5RAQ01344 420 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 ACSM1Q08AH1 577 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 MRPL28Q13084 256 aaKnown RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 CD226Q15762 336 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF181Q2M3W8 571 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 TRIM61Q5EBN2 209 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 VWA2Q5GFL6 755 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 FIGNL1Q6PIW4 674 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 ATCAYQ86WG3 371 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SLC44A2Q8IWA5 706 aaPredicted RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SLC34A3Q8N130 599 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 LNX2Q8N448 690 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SUMF1Q8NBK3 374 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 OR4C3Q8NH37 302 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 ELP5Q8TE02 316 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SNAPC3Q92966 411 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 GTPBP3Q969Y2 492 aaKnown RBP7.32□□□□□ -1.24
COL21A1-212ENST00000535941 FN3KQ9H479 309 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 IL20RAQ9UHF4 553 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 SDK2Q58EX2 2172 aa7.32□□□□□ -1.24
COL21A1-212ENST00000535941 NPIPA5A0A0B4J1W7 369 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 CCDC182A6NF36 153 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 OR6C70A6NIJ9 312 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 A8MUA0 341 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 ZNF99A8MXY4 864 aaPredicted RBP7.31□□□□□ -1.24
COL21A1-212ENST00000535941 NPIPA7E9PJI5 369 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 AP3D1O14617 1153 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 NPIPB7O75200 414 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 KLF7O75840 302 aaPredicted RBP7.31□□□□□ -1.24
COL21A1-212ENST00000535941 UMODP07911 640 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 NPIPA8P0DM63 369 aa7.31□□□□□ -1.24
COL21A1-212ENST00000535941 CFL1P23528 166 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms