RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 PLBD1Q6P4A8 553 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 TMEM205Q6UW68 189 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 C5orf46Q6UWT4 87 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 THSD4Q6ZMP0 1018 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 DBX2Q6ZNG2 339 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 KLHL36Q8N4N3 616 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 APCDD1LQ8NCL9 501 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 TNFRSF13CQ96RJ3 184 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 GPX7Q96SL4 187 aaPredicted RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 SPSB2Q99619 263 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 COQ7Q99807 217 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ADAM19Q9H013 955 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 MCCC2Q9HCC0 563 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 STUB1Q9UNE7 303 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 SLC6A5Q9Y345 797 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 LAMA1P25391 3075 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 LOC100506127A0A0U1RQW1 187 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 CLDN25C9JDP6 229 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 KHNYNO15037 678 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 LDOC1O95751 146 aaPredicted RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 TSPAN19P0C672 248 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 FUT1P19526 365 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 PTNP21246 168 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 EVI2BP34910 448 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ETV5P41161 510 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ENTPD1P49961 510 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ETV1P50549 477 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 P2RX1P51575 399 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 MC2RQ01718 297 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 TPBGQ13641 420 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ZNF846Q147U1 533 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 SSX1Q16384 188 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 PAPD4Q6PIY7 484 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 APOOLQ6UXV4 268 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 TMPRSS11AQ6ZMR5 421 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 CPEB2Q7Z5Q1 589 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 GATSQ8NAP1 163 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 OR5W2Q8NH69 310 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 UFD1Q92890 307 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 TMCO6Q96DC7 493 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 CHCHD6Q9BRQ6 235 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ARHGAP9Q9BRR9 750 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 SLIRPQ9GZT3 109 aaKnown RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 OR51E2Q9H255 320 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 ZBTB20Q9HC78 741 aaPredicted RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 CHRNA9Q9UGM1 479 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 GPN3Q9UHW5 284 aaPredicted RBP12.25□□□□□ -0.45
BEST1-208ENST00000534553 SSR3Q9UNL2 185 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 NPFFR2Q9Y5X5 522 aa12.25□□□□□ -0.45
BEST1-208ENST00000534553 COL6A3P12111 3177 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 FADS1O60427 444 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 SLC2A10O95528 541 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 PPP1R3DO95685 299 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 LIMS3P0CW19 117 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 LIMS4P0CW20 117 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 HTR3AP46098 478 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 BMXP51813 675 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 ACTC1P68032 377 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 ACTA1P68133 377 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 ZNF117Q03924 483 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 ITGADQ13349 1161 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 FHL1Q13642 323 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 ZNF404Q494X3 552 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 LCN1P1Q5VSP4 162 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 FAAH2Q6GMR7 532 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 CBLN3Q6UW01 205 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 PHC2Q8IXK0 858 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 PRR22Q8IZ63 422 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 ACBD7Q8N6N7 88 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 BMPERQ8N8U9 685 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 SLC37A3Q8NCC5 494 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 OR2I1PQ8NGU4 316 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 SECISBP2Q96T21 854 aaKnown RBP12.24□□□□□ -0.45
BEST1-208ENST00000534553 NRSN2Q9GZP1 204 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 RXFP3Q9NSD7 469 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 OCIAD1Q9NX40 245 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 B3GNT3Q9Y2A9 372 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 HIF3AQ9Y2N7 669 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 CAB39Q9Y376 341 aaPredicted RBP12.24□□□□□ -0.45
BEST1-208ENST00000534553 SEC16AO15027 2179 aa12.24□□□□□ -0.45
BEST1-208ENST00000534553 IGKV1D-42A0A075B6H8 117 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 CDC14CA4D256 554 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 B4E171 279 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 C9J4A7 227 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 J3QRE1 110 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 IMPA2O14732 288 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 CCKBRP32239 447 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 TSPAN7P41732 249 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 SUMO3P55854 103 aaPredicted RBP12.23□□□□□ -0.45
BEST1-208ENST00000534553 RAB15P59190 212 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 LGALS3BPQ08380 585 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 ZNF74Q16587 644 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 SLC35F1Q5T1Q4 408 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 SHISA6Q6ZSJ9 500 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 MCFD2Q8NI22 146 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 TTC9Q92623 222 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 ARSGQ96EG1 525 aa12.23□□□□□ -0.45
BEST1-208ENST00000534553 SH3YL1Q96HL8 342 aaPredicted RBP12.23□□□□□ -0.45
BEST1-208ENST00000534553 ERMAPQ96PL5 475 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms