RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	hCG_38984	A0A1B0GV85	526 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	LRP5L	A4QPB2	252 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR5H15	A6NDH6	313 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF840P	A6NDX5	716 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TCP10L2	B9ZVM9	353 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF701	M0R085	212 aa	Predicted RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	HAS3	O00219	553 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	CASK	O14936	926 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TAPBP	O15533	448 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	N4BP1	O75113	896 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	STX11	O75558	287 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	RPSA	P08865	295 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	PATE4	P0C8F1	98 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ATP1B2	P14415	290 aa	Predicted RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	RPL35A	P18077	110 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	AOC1	P19801	751 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	C4BPB	P20851	252 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	MSR1	P21757	451 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	U2AF2	P26368	475 aa	Known RBP eCLIP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	CHRNB4	P30926	498 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	HNRNPH3	P31942	346 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OTX1	P32242	354 aa	Predicted RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	SLC1A4	P43007	532 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	CRYBB2	P43320	205 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	BRCC3	P46736	316 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	PLP1	P60201	277 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	GK3P	Q14409	553 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TGFBI	Q15582	683 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	SBK1	Q52WX2	424 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	PLCXD3	Q63HM9	321 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ATRAID	Q6UW56	229 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	HACD2	Q6Y1H2	254 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TRPT1	Q86TN4	253 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	KCNMB4	Q86W47	210 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	KRTAP7-1	Q8IUC3	87 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TBC1D10C	Q8IV04	446 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR4N5	Q8IXE1	308 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	CLEC4F	Q8N1N0	589 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	FGFRL1	Q8N441	504 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979		Q8N9G6	341 aa	Predicted RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	CHDH	Q8NE62	594 aa	Predicted RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR2L3	Q8NG85	312 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR4F17	Q8NGA8	305 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR4K14	Q8NGD5	310 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR4F5	Q8NH21	305 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	GPX8	Q8TED1	209 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	MITD1	Q8WV92	249 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TAF15	Q92804	592 aa	Known RBP eCLIP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	SLC38A4	Q969I6	547 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ZNF354B	Q96LW1	612 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	OR4F4	Q96R69	305 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	FEM1A	Q9BSK4	669 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	TRIM62	Q9BVG3	475 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ST6GALNAC5	Q9BVH7	336 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	ANKRD60	Q9BZ19	345 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	COMMD4	Q9H0A8	199 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	AZI2	Q9H6S1	392 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	SLC17A5	Q9NRA2	495 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	DCAF13	Q9NV06	445 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	MRPL39	Q9NYK5	338 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	MTRF1L	Q9UGC7	380 aa	Known RBP	3.93	□□□□□ -1.78
ATM-223	ENST00000533979	SLC7A8	Q9UHI5	535 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	CYTH4	Q9UIA0	394 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	RNF215	Q9Y6U7	377 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	SZT2	Q5T011	3432 aa		3.93	□□□□□ -1.78
ATM-223	ENST00000533979	FLT4	P35916	1363 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	NHS	Q6T4R5	1651 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979		A0A0A6YYD4	124 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	LOC100506127	A0A0U1RQW1	187 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	FRG2C	A6NGY1	282 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	PDLIM1	O00151	329 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	LSM1	O15116	133 aa	Known RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	YKT6	O15498	198 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	KHDRBS3	O75525	346 aa	Known RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	H6PD	O95479	791 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	CLDN9	O95484	217 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	IGSF6	O95976	241 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	GPI	P06744	558 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	H2BFM	P0C1H6	154 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	IGHV4-38-2	P0DP08	117 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	MCF2	P10911	925 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SLC2A2	P11168	524 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	H2AFX	P16104	143 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	XRCC1	P18887	633 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	TNNI1	P19237	187 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	GIF	P27352	417 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	CCNH	P51946	323 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	GSC	P56915	257 aa	Predicted RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	DAOA	P59103	153 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	GNB1	P62873	340 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	NTHL1	P78549	312 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	BASP1	P80723	227 aa	Known RBP	3.92	□□□□□ -1.78
ATM-223	ENST00000533979	PEX6	Q13608	980 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SLC17A1	Q14916	467 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	P2RY6	Q15077	328 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979		Q3ZCU0	254 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	SLX4IP	Q5VYV7	408 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	ACSM5	Q6NUN0	579 aa		3.92	□□□□□ -1.78
ATM-223	ENST00000533979	NEPRO	Q6NW34	567 aa		3.92	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms