RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 MPEG1Q2M385 716 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 COL13A1Q5TAT6 717 aaPredicted RBP6.56□□□□□ -1.36
CTNND1-236ENST00000533667 HBMQ6B0K9 141 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 MISPQ8IVT2 679 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 GLB1L2Q8IW92 636 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 LSMEM2Q8N112 164 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 SLC2A12Q8TD20 617 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 TMEM100Q9NV29 134 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 REV1Q9UBZ9 1251 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 ACAD8Q9UKU7 415 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 HS3ST2Q9Y278 367 aa6.56□□□□□ -1.36
CTNND1-236ENST00000533667 GABRPO00591 440 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SEC14L5O43304 696 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GALR3O60755 368 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SPDEFO95238 335 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 KCNK5O95279 499 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SNAPINO95295 136 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 KNG1P01042 644 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF28P17035 718 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 JUNBP17275 347 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SERPINF1P36955 418 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TSFMP43897 325 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 MTNR1BP49286 362 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 VEGFCP49767 419 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CAV2P51636 162 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 KCNJ10P78508 379 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 IL13RA1P78552 427 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LTB4RQ15722 352 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 NKPD1Q17RQ9 610 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 MARCH8Q5T0T0 291 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ABHD17BQ5VST6 288 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.55□□□□□ -1.361e-8■■■□□ 16
CTNND1-236ENST00000533667 USP53Q70EK8 1073 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF561Q8N587 486 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LINC00469Q8N7U9 141 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ACBD4Q8NC06 268 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 PHOSPHO2Q8TCD6 241 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FAM3CQ92520 227 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 BADQ92934 168 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ZNF583Q96ND8 569 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RBM14Q96PK6 669 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CRB3Q9BUF7 120 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RLIMQ9NVW2 624 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SPATA6Q9NWH7 488 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 COQ3Q9NZJ6 369 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 USP36Q9P275 1121 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FTSJ1Q9UET6 329 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LSM5Q9Y4Y9 91 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ACTL7AQ9Y615 435 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CBY3A6NI87 242 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TMEM212A6NML5 194 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 A8MXE2 369 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 D6RAR5 112 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 AIPO00170 330 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SULT2B1O00204 365 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 B4GAT1O43505 415 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR2T7P0C7T2 308 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 C21orf33P30042 268 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 HOXA9P31269 272 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SLC5A2P31639 672 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 APLNRP35414 380 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TNFRSF4P43489 277 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CX3CR1P49238 355 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 MGAT3Q09327 533 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GPR18Q14330 331 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 AVPI1Q5T686 147 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 Q6ZSR6 202 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TECPR1Q7Z6L1 1165 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SULF2Q8IWU5 870 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 KLHDC8BQ8IXV7 354 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FAM160A2Q8N612 972 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 DNAAF1Q8NEP3 725 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR2T27Q8NH04 317 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR1S1Q8NH92 325 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 TAAR8Q969N4 342 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SFXN2Q96NB2 322 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LRFN5Q96NI6 719 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 OR14A2Q96R54 314 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LINC00597Q9H2U6 94 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GAREM1Q9H706 876 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 SLC6A20Q9NP91 592 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 DIMT1Q9UNQ2 313 aaKnown RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FBXO7Q9Y3I1 522 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ATG4BQ9Y4P1 393 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 A6NCN8 305 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ANKRD30BLA7E2S9 258 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 IGHG1P01857 330 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LPLP06858 475 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 C1SP09871 688 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GM2AP17900 193 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CR2P20023 1033 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 NFYAP23511 347 aaPredicted RBP6.55□□□□□ -1.36
CTNND1-236ENST00000533667 GIFP27352 417 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CHATP28329 748 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 CTHP32929 405 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 FOLR3P41439 243 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 ALDH3B1P43353 468 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 RAB38P57729 211 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 YPEL5P62699 121 aa6.55□□□□□ -1.36
CTNND1-236ENST00000533667 LTBQ06643 244 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms