RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 CCDC126Q96EE4 140 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 MOCOSQ96EN8 888 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SMARCD1Q96GM5 515 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 COQ10AQ96MF6 247 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 OR2V2Q96R30 315 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 RNF2Q99496 336 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SDHCQ99643 169 aaPredicted RBP5.08□□□□□ -1.6
CD44-236ENST00000533222 CMSS1Q9BQ75 279 aaKnown RBP5.08□□□□□ -1.6
CD44-236ENST00000533222 FAM110AQ9BQ89 295 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SH2D3AQ9BRG2 576 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 C11orf70Q9BRQ4 267 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SLC35A5Q9BS91 424 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 H2AFJQ9BTM1 129 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 ZNF747Q9BV97 191 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 APOL6Q9BWW8 343 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 ACTR3CQ9C0K3 210 aaPredicted RBP5.08□□□□□ -1.6
CD44-236ENST00000533222 WWTR1Q9GZV5 400 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SMOC2Q9H3U7 446 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 DUSP21Q9H596 190 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 ZNF430Q9H8G1 570 aaPredicted RBP5.08□□□□□ -1.6
CD44-236ENST00000533222 EVA1AQ9H8M9 152 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 WFDC1Q9HC57 220 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 CSNK1G1Q9HCP0 422 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SMCO4Q9NRQ5 59 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 PNO1Q9NRX1 252 aaKnown RBP5.08□□□□□ -1.6
CD44-236ENST00000533222 SLC22A11Q9NSA0 550 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 ECHDC1Q9NTX5 307 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 TMLHEQ9NVH6 421 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 C1orf109Q9NX04 203 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 P4HTMQ9NXG6 502 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 CLEC5AQ9NY25 188 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SLC17A6Q9P2U8 582 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 MGAT4CQ9UBM8 478 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 LEF1Q9UJU2 399 aaPredicted RBP5.08□□□□□ -1.6
CD44-236ENST00000533222 C3orf18Q9UK00 162 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 CLEC4EQ9ULY5 219 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 SLC7A11Q9UPY5 501 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 TPRKBQ9Y3C4 175 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 ENTPD2Q9Y5L3 495 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 PHIPQ8WWQ0 1821 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 MROH2AA6NES4 1674 aa5.08□□□□□ -1.6
CD44-236ENST00000533222 ABCC1P33527 1531 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 FER1L6Q2WGJ9 1857 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 NALCNQ8IZF0 1738 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 XRN1Q8IZH2 1706 aaKnown RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 CENPVL1A0A0U1RR11 272 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 IQCMA0A1B0GVH7 501 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 HMSDA8MTL9 139 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SGK494L7N484 410 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 DVL1O14640 695 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 OR10H2O60403 315 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 RAMP3O60896 148 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 KHDRBS3O75525 346 aaKnown RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 CLDN9O95484 217 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 ABHD16AO95870 558 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 C6orf47O95873 294 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SERPINA3P01011 423 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 ITGA5P08648 1049 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 OR8U8P0C7N1 319 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SNHG28P0DPA3 235 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 CTSAP10619 480 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 NQO2P16083 231 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 PGAM1P18669 254 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 TNFRSF1AP19438 455 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 ABCD3P28288 659 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SFNP31947 248 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 RPS9P46781 194 aaKnown RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 FMO5P49326 533 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 MRPL19P49406 292 aaKnown RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 CYB561P49447 251 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 TAF6P49848 677 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 CYP2J2P51589 502 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SUOXP51687 545 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 FGF8P55075 233 aaPredicted RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 BIDP55957 195 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 TIMM10P62072 90 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 CAPSQ13938 189 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 FGFBP1Q14512 234 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SLC10A1Q14973 349 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 PEA15Q15121 130 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 CARTPTQ16568 116 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 NRF1Q16656 503 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 ISXQ2M1V0 245 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 KLHL22Q53GT1 634 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 PLA1AQ53H76 456 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 XKR6Q5GH73 641 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 C6orf141Q5SZD1 244 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 SPOUT1Q5T280 376 aaKnown RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 LGSNQ5TDP6 509 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 OR2G6Q5TZ20 316 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 RRAGBQ5VZM2 374 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 ZNF470Q6ECI4 717 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 PSRC1Q6PGN9 363 aaPredicted RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 ALKAL1Q6UXT8 129 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 RBMS3Q6XE24 437 aaKnown RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 FAM83HQ6ZRV2 1179 aaPredicted RBP5.07□□□□□ -1.6
CD44-236ENST00000533222 LRRC70Q7Z2Q7 622 aa5.07□□□□□ -1.6
CD44-236ENST00000533222 PIWIL4Q7Z3Z4 852 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms