RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 LRIF1Q5T3J3 769 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF836Q6ZNA1 936 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF440Q8IYI8 595 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 THOC1Q96FV9 657 aaKnown RBP26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 ZC3HAV1LQ96H79 300 aaKnown RBP26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 RLIMQ9NVW2 624 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 SLC25A37Q9NYZ2 338 aa26.95■■□□□ 1.9
SSSCA1-207ENST00000533115 A0A1W2PPR1 153 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 FESP07332 822 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 NUDT7P0C024 238 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 KLK2P20151 261 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 SLC1A3P43003 542 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 CLK1P49759 484 aaKnown RBP26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 TFAP2EQ6VUC0 442 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 ARL5BQ96KC2 179 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 FOXC2Q99958 501 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 A4GALTQ9NPC4 353 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 SLAMF8Q9P0V8 285 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF443Q9Y2A4 671 aaPredicted RBP26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 HDGFL3Q9Y3E1 203 aa26.94■■□□□ 1.9
SSSCA1-207ENST00000533115 TMED7-TICAM2A0A0A6YYA0 188 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 PMS2P2O95744 297 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 BMP2P12643 396 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 CCNA2P20248 432 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 POLR2HP52434 150 aaKnown RBP26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 PAGE3Q5JUK9 113 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 MTDHQ86UE4 582 aaKnown RBP26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 MSRB3Q8IXL7 192 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 OR11A1Q9GZK7 315 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 OSGIN1Q9UJX0 560 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 GPR52Q9Y2T5 361 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 TMED7Q9Y3B3 224 aa26.93■■□□□ 1.9
SSSCA1-207ENST00000533115 EDF1O60869 148 aaKnown RBP26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 RAF1P04049 648 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 THBS1P07996 1170 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 PSMB1P20618 241 aaKnown RBP26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 TACR3P29371 465 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 LARS2Q15031 903 aaKnown RBP26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 ZSWIM7Q19AV6 140 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 RNF220Q5VTB9 566 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 PRAMEF8Q5VWM4 474 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 PRAMEF7Q5VXH5 474 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 MAL2Q969L2 176 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 PIK3IP1Q96FE7 263 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 OR10A4Q9H209 315 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 RABEP2Q9H5N1 569 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 CACYBPQ9HB71 228 aaKnown RBP26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 BCL2L10Q9HD36 194 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 PRDM4Q9UKN5 801 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF232Q9UNY5 417 aa26.92■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF724A8MTY0 619 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 GCM2O75603 506 aaPredicted RBP26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 THBDP07204 575 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 GKN3PP0CG01 181 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 NCF2P19878 526 aaPredicted RBP26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 GABRG1Q8N1C3 465 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 ZHX1-C8orf76Q96EF9 292 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 DNAJA3Q96EY1 480 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF300Q96RE9 604 aaPredicted RBP26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 ACTR6Q9GZN1 396 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 CXXC4Q9H2H0 198 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 NPHS2Q9NP85 383 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 DCTN4Q9UJW0 460 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 IFT52Q9Y366 437 aa26.91■■□□□ 1.9
SSSCA1-207ENST00000533115 A0A1W2PP18 115 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 TMEM72A0PK05 275 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF208O43345 1280 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 DNPH1O43598 174 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ATE1O95260 518 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 PPIBP23284 216 aaKnown RBP26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ACAA2P42765 397 aaKnown RBP26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 MAP2K6P52564 334 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 KEAP1Q14145 624 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ABLIM2Q6H8Q1 611 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 CXorf67Q86X51 503 aaPredicted RBP26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 CLIP4Q8N3C7 705 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ZNF775Q96BV0 537 aaPredicted RBP26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 DDIT4LQ96D03 193 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 MBD6Q96DN6 1003 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 SPATA9Q9BWV2 254 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 HDHD5Q9BXW7 423 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ADAM19Q9H013 955 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 ARMC7Q9H6L4 198 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 VAPAQ9P0L0 249 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 TRAPPC4Q9Y296 219 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 GMEB1Q9Y692 573 aa26.9■■□□□ 1.9
SSSCA1-207ENST00000533115 TRBV5-3A0A0A0MS03 114 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 PDK3Q15120 406 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 BBS10Q8TAM1 723 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 SIKE1Q9BRV8 207 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 TMEM181Q9P2C4 612 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 TRIM33Q9UPN9 1127 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 CHST2Q9Y4C5 530 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 FREM1Q5H8C1 2179 aa26.89■■□□□ 1.9
SSSCA1-207ENST00000533115 C5orf58C9J3I9 102 aa26.88■■□□□ 1.89
SSSCA1-207ENST00000533115 OR3A2P47893 321 aa26.88■■□□□ 1.89
SSSCA1-207ENST00000533115 ZNF311Q5JNZ3 666 aa26.88■■□□□ 1.89
SSSCA1-207ENST00000533115 STEAP2Q8NFT2 490 aa26.88■■□□□ 1.89
SSSCA1-207ENST00000533115 ZNF385DQ9H6B1 395 aa26.88■■□□□ 1.89
SSSCA1-207ENST00000533115 IGKV3D-15A0A087WSY6 115 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms