RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 PHC1P78364 1004 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF117Q03924 483 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 SCGB2A2Q13296 93 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 CD226Q15762 336 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 FBXW9Q5XUX1 488 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 C3orf33Q6P1S2 294 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 ZCCHC12Q6PEW1 402 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 UGT2A3Q6UWM9 527 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 C17orf78Q8N4C9 275 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 OR52N5Q8NH56 324 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 ZFP28Q8NHY6 868 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 CDC26Q8NHZ8 85 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 FBXO27Q8NI29 283 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 METTL6Q8TCB7 284 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 MAELQ96JY0 434 aaKnown RBP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 CCT7Q99832 543 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 CCDC106Q9BWC9 280 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 TAS2R16Q9NYV7 291 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 NTMQ9P121 344 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 MARCOQ9UEW3 520 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 FBXO9Q9UK97 447 aaPredicted RBP10.92□□□□□ -0.66
CAPN1-223ENST00000533079 TRIM33Q9UPN9 1127 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 TRAF6Q9Y4K3 522 aa10.92□□□□□ -0.66
CAPN1-223ENST00000533079 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.91□□□□□ -0.661e-8■■□□□ 11.7
CAPN1-223ENST00000533079 PCNX3Q9H6A9 2034 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 IGHV3-15A0A0B4J1V0 119 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 IGHV4-61A0A0C4DH41 118 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 CIB4A0PJX0 185 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 M0R1B8 84 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 SUPT7LO94864 414 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 NUDT14O95848 222 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 PRDX6P30041 224 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 SRP14P37108 136 aaKnown RBP10.91□□□□□ -0.66
CAPN1-223ENST00000533079 MNAT1P51948 309 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 NCALDP61601 193 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 SNRPD2P62316 118 aaKnown RBP10.91□□□□□ -0.66
CAPN1-223ENST00000533079 HSPB3Q12988 150 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 LCP2Q13094 533 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 PDK3Q15120 406 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 UGT3A2Q3SY77 523 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 TMEM176BQ3YBM2 270 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-223ENST00000533079 IQCCQ4KMZ1 466 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 SLC25A53Q5H9E4 307 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 COX18Q8N8Q8 333 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 C1orf162Q8NEQ5 155 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-223ENST00000533079 HPS1Q92902 700 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 C3orf49Q96BT1 292 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 ZNF300Q96RE9 604 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-223ENST00000533079 EBF4Q9BQW3 602 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 BHLHE41Q9C0J9 482 aaPredicted RBP10.91□□□□□ -0.66
CAPN1-223ENST00000533079 NMUR2Q9GZQ4 415 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 LRMDAQ9H2I8 198 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 MEAF6Q9HAF1 191 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 ASB6Q9NWX5 421 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 ICAM5Q9UMF0 924 aa10.91□□□□□ -0.66
CAPN1-223ENST00000533079 TENM1Q9UKZ4 2725 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 IGKV3D-15A0A087WSY6 115 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 H3BNH8 94 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 ETV2O00321 342 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-223ENST00000533079 PDPK1O15530 556 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 KCNAB3O43448 404 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 EFNA2O43921 213 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 LY6HO94772 140 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 PRKCAP17252 672 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 GPC1P35052 558 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 HTR6P50406 440 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 CHN2P52757 468 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 PKNOX1P55347 436 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 CSNK2A1P68400 391 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-223ENST00000533079 SWI5Q1ZZU3 235 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 PRSS53Q2L4Q9 553 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 FAM174BQ3ZCQ3 159 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 ABLIM2Q6H8Q1 611 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 DEF8Q6ZN54 512 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 SEMA6DQ8NFY4 1073 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 PHOSPHO1Q8TCT1 267 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 APH1AQ96BI3 265 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 GIMAP5Q96F15 307 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 C1orf159Q96HA4 380 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 METTL2AQ96IZ6 378 aaKnown RBP10.9□□□□□ -0.66
CAPN1-223ENST00000533079 SORCS2Q96PQ0 1159 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 BPESC1Q9GZL8 116 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 HOXD1Q9GZZ0 328 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 TCF7L2Q9NQB0 619 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 GIN1Q9NXP7 522 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 TMEFF2Q9UIK5 374 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-223ENST00000533079 AMDHD2Q9Y303 409 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 ATP23Q9Y6H3 246 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 PRR14LQ5THK1 2151 aa10.9□□□□□ -0.66
CAPN1-223ENST00000533079 GPR171O14626 319 aa10.89□□□□□ -0.67
CAPN1-223ENST00000533079 ALOX5P09917 674 aa10.89□□□□□ -0.67
CAPN1-223ENST00000533079 ACP2P11117 423 aa10.89□□□□□ -0.67
CAPN1-223ENST00000533079 EDNRAP25101 427 aa10.89□□□□□ -0.67
CAPN1-223ENST00000533079 CHRNEQ04844 493 aa10.89□□□□□ -0.67
CAPN1-223ENST00000533079 DUSP5Q16690 384 aa10.89□□□□□ -0.67
CAPN1-223ENST00000533079 SLC9B1Q4ZJI4 515 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms