RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 OTUB2Q96DC9 234 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 RRNAD1Q96FB5 475 aaKnown RBP6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 NIPSNAP1Q9BPW8 284 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 SULT4A1Q9BR01 284 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 ZNF649Q9BS31 505 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 BARHL1Q9BZE3 327 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 OR51V1Q9H2C8 321 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MIXL1Q9H2W2 232 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CTPS2Q9NRF8 586 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 MED9Q9NWA0 146 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 PPP1R14DQ9NXH3 145 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 WASF3Q9UPY6 502 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 DMRT1Q9Y5R6 373 aa6.34□□□□□ -1.39
TGFBR3-209ENST00000532540 CHD9Q3L8U1 2897 aa6.34□□□□□ -1.4
TGFBR3-209ENST00000532540 COL4A6Q14031 1691 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 EDDM13A0A1B0GTR0 161 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CPED1A4D0V7 1026 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM221BA6H8Z2 402 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 EFCAB7A8K855 629 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 NUDT19A8MXV4 375 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 H0Y8X5 98 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 PRODHO43272 600 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 MPC2O95563 127 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 GTF2F2P13984 249 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 BMP8BP34820 402 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 AQP2P41181 271 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 MECP2P51608 486 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 RAG2P55895 527 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 HSD17B7P56937 341 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 HMGN3Q15651 99 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 HFEQ30201 348 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 LAIR2Q6ISS4 152 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 LIMS2Q7Z4I7 341 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ACBD7Q8N6N7 88 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 UBAC2Q8NBM4 344 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2A12Q8NGT7 310 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 OR10R2Q8NGX6 335 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM159Q96B96 161 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 POTEKPQ9BYX7 375 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 OR51I1Q9H343 314 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF226Q9NYT6 803 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ACAD8Q9UKU7 415 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 KCNMB2Q9Y691 235 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A087WZY1 265 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 C7orf66A4D0T2 115 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF593O00488 134 aaPredicted RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC31A2O15432 143 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 BRINP1O60477 761 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SFTPCP11686 197 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 GABRA1P14867 456 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 HPGDP15428 266 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF8P17098 575 aaPredicted RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ADH6P28332 368 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 HOXA9P31269 272 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ACTR1BP42025 376 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CRYBB2P43320 205 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 PTH2RP49190 550 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CCR9P51686 369 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ARSDP51689 593 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ACTR1AP61163 376 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 MRPS10P82664 201 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 MTAPQ13126 283 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ELAVL3Q14576 367 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 GLT8D1Q68CQ7 371 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM215Q68D42 235 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ETFRF1Q6IPR1 90 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 FBXO15Q8NCQ5 510 aaPredicted RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 BRIX1Q8TDN6 353 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 PMM1Q92871 262 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 MAL2Q969L2 176 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CMTM7Q96FZ5 175 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 LRFN5Q96NI6 719 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 FAIM2Q9BWQ8 316 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ACKR4Q9NPB9 350 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 KCNJ16Q9NPI9 418 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TREM2Q9NZC2 230 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 AHSPQ9NZD4 102 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A1W2PPK0 400 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A1W2PRQ8 180 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM218A2RU14 115 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 NPIPB15A6NHN6 443 aaPredicted RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 DNASE2O00115 360 aaPredicted RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 AP4M1O00189 453 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 PHOX2AO14813 284 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 FGF2P09038 288 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 FBP1P09467 338 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SULT1A3P0DMM9 295 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SULT1A4P0DMN0 295 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 MGMTP16455 207 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CSNK1EP49674 416 aaKnown RBP6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ARL4DP49703 201 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CASP6P55212 293 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 CHIT1Q13231 466 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 SCGB2B2Q4G0G5 96 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF628Q5EBL2 1059 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF311Q5JNZ3 666 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 EOGTQ5NDL2 527 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM220Q6QAJ8 160 aa6.33□□□□□ -1.4
TGFBR3-209ENST00000532540 KCTD9Q7L273 389 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms