RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 HDGFL3Q9Y3E1 203 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 TESMINQ9Y4I5 508 aa20.49■□□□□ 0.87
CAPN1-222ENST00000532285 SPG11Q96JI7 2443 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 TMED7-TICAM2A0A0A6YYA0 188 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 IGHV3-15A0A0B4J1V0 119 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 ANGPT2O15123 496 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 YES1P07947 543 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 ARAFP10398 606 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 GPX2P18283 190 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 MAP2K6P52564 334 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 EXOC3L2Q2M3D2 409 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 GCNT6Q5T4J0 391 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 FBXW10Q5XX13 1052 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 BEND4Q6ZU67 534 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 TUSC5Q8IXB3 177 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 DPP10Q8N608 796 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 C12orf49Q9H741 205 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 MRGBPQ9NV56 204 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 FGFR1OP2Q9NVK5 253 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 TMED7Q9Y3B3 224 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 FREM1Q5H8C1 2179 aa20.48■□□□□ 0.87
CAPN1-222ENST00000532285 SMAD9O15198 467 aaKnown RBP20.47■□□□□ 0.87
CAPN1-222ENST00000532285 CYTIPO60759 359 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 PGM3O95394 542 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 PMS2P2O95744 297 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 VIMP08670 466 aaKnown RBP20.47■□□□□ 0.87
CAPN1-222ENST00000532285 GKN3PP0CG01 181 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 ETS2P15036 469 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 ZNF311Q5JNZ3 666 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 ZNF550Q7Z398 422 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 CLIP4Q8N3C7 705 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 DDIT4LQ96D03 193 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 WFIKKN1Q96NZ8 548 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 KLHL4Q9C0H6 718 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 ADAM19Q9H013 955 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 BCO1Q9HAY6 547 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 OSGIN1Q9UJX0 560 aa20.47■□□□□ 0.87
CAPN1-222ENST00000532285 ZNF208O43345 1280 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 CCNA2P20248 432 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 TACR3P29371 465 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 ACAA2P42765 397 aaKnown RBP20.46■□□□□ 0.87
CAPN1-222ENST00000532285 COPZ1P61923 177 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 CDK6Q00534 326 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 GUCY1A3Q02108 690 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 RASGEF1BQ0VAM2 473 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 RUNDC3AQ59EK9 446 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 REEP3Q6NUK4 255 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 DHDDSQ86SQ9 333 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 MTDHQ86UE4 582 aaKnown RBP20.46■□□□□ 0.87
CAPN1-222ENST00000532285 CDC20BQ86Y33 519 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 NFKBIDQ8NI38 313 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 ZHX1-C8orf76Q96EF9 292 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 ARL5BQ96KC2 179 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 PSD2Q9BQI7 771 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 CPPED1Q9BRF8 314 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-222ENST00000532285 MED18Q9BUE0 208 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 OR11A1Q9GZK7 315 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 IKZF5Q9H5V7 419 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 CCDC134Q9H6E4 229 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 TMEM38AQ9H6F2 299 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 TRAPPC4Q9Y296 219 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 ABCA4P78363 2273 aa20.46■□□□□ 0.87
CAPN1-222ENST00000532285 DNPH1O43598 174 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 FESP07332 822 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 CCKARP32238 428 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 ARFIP2P53365 341 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 WBP2NLQ6ICG8 309 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 NUFIP2Q7Z417 695 aaKnown RBP20.45■□□□□ 0.86
CAPN1-222ENST00000532285 KRT73Q86Y46 540 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 LURAP1LQ8IV03 231 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 C10orf111Q8N326 155 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 SLC35B4Q969S0 331 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 KLHL28Q9NXS3 571 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 ZNF226Q9NYT6 803 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 TMEM181Q9P2C4 612 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 CHST2Q9Y4C5 530 aa20.45■□□□□ 0.86
CAPN1-222ENST00000532285 CCDC168Q8NDH2 2452 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 TMEM72A0PK05 275 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 ATP8B1O43520 1251 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 SLC6A2P23975 617 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 CXCR1P25024 350 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 STAC2Q6ZMT1 411 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 RETREG3Q86VR2 466 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 CADM2Q8N3J6 435 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 ANKRD27Q96NW4 1050 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 CGREF1Q99674 301 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 SPATA5L1Q9BVQ7 753 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 ING1Q9UK53 422 aaPredicted RBP20.44■□□□□ 0.86
CAPN1-222ENST00000532285 ITGB1BP2Q9UKP3 347 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 EDARQ9UNE0 448 aa20.44■□□□□ 0.86
CAPN1-222ENST00000532285 ZNF724A8MTY0 619 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 PRG2P13727 222 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 PPP3CBP16298 524 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 KLK2P20151 261 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 DNAJA1P31689 397 aaKnown RBP20.43■□□□□ 0.86
CAPN1-222ENST00000532285 OR2B6P58173 313 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 SCARB2Q14108 478 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 PDK3Q15120 406 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 ADRM1Q16186 407 aa20.43■□□□□ 0.86
CAPN1-222ENST00000532285 CGB2Q6NT52 195 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms