RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 METTL27Q8N6F8 245 aaPredicted RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 IQCF1Q8N6M8 205 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 ZSCAN1Q8NBB4 408 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 OR4Q3Q8NH05 313 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 OR5W2Q8NH69 310 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 UFD1Q92890 307 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 C3orf49Q96BT1 292 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 CCDC74BQ96LY2 380 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 SNX18Q96RF0 628 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 MNTQ99583 582 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 ARHGAP9Q9BRR9 750 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 MED18Q9BUE0 208 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 NUDT9Q9BW91 350 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 NXF2Q9GZY0 626 aaKnown RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 LIN28AQ9H9Z2 209 aaKnown RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 MEPEQ9NQ76 525 aaPredicted RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 ASB6Q9NWX5 421 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 TNFRSF10DQ9UBN6 386 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 GPN3Q9UHW5 284 aaPredicted RBP11.26□□□□□ -0.61
CHD7-211ENST00000532149 DTX4Q9Y2E6 619 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 NOX1Q9Y5S8 564 aa11.26□□□□□ -0.61
CHD7-211ENST00000532149 A0A075B6Q4 140 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 NPIPA5A0A0B4J1W7 369 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 IDSB3KWA1 339 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 D6RAR5 112 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 NPIPA7E9PJI5 369 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 SLC30A4O14863 429 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 KHNYNO15037 678 aaKnown RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 OR2T1O43869 369 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 TMEM127O75204 238 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 ZFAND5O76080 213 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 NADKO95544 446 aaPredicted RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 IL1AP01583 271 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 HLA-DPB1P04440 258 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 HIST1H2ABP04908 130 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 IGFBP1P08833 259 aaPredicted RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 HSMCR30P0CW71 290 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 NPIPA8P0DM63 369 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 FUT1P19526 365 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 MAKP20794 623 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 FGF9P31371 208 aaPredicted RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 GABRA5P31644 462 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 CCKBRP32239 447 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 P2RX1P51575 399 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 BLVRAP53004 296 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 DLX5P56178 289 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 RNF4P78317 190 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 E2F1Q01094 437 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 ZNF45Q02386 682 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 CRYZQ08257 329 aaKnown RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 C17orf67Q0P5P2 114 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 VWA2Q5GFL6 755 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 CLEC12AQ5QGZ9 265 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 PERM1Q5SV97 790 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 KIRREL2Q6UWL6 708 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 COX15Q7KZN9 410 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 HIST3H2AQ7L7L0 130 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 CPEB2Q7Z5Q1 589 aaKnown RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 ANKRD37Q7Z713 158 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 ATG4DQ86TL0 474 aaPredicted RBP11.25□□□□□ -0.61
CHD7-211ENST00000532149 ZNF563Q8TA94 476 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 STK35Q8TDR2 534 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 GRHL3Q8TE85 626 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 ST8SIA1Q92185 356 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 HIST1H2ACQ93077 130 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 PPP1R14BQ96C90 147 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 OMA1Q96E52 524 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 RHNO1Q9BSD3 238 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 DSN1Q9H410 356 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 FKRPQ9H9S5 495 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 ZNF229Q9UJW7 825 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 MOKQ9UQ07 419 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 HIF3AQ9Y2N7 669 aa11.25□□□□□ -0.61
CHD7-211ENST00000532149 SEC16AO15027 2179 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 TRIOO75962 3097 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 C9J4A7 227 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 MEN1O00255 615 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 ST8SIA5O15466 376 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 TRIM3O75382 744 aaPredicted RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 CSO75390 466 aaKnown RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 LDOC1O95751 146 aaPredicted RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 CD1AP06126 327 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 GP1BBP13224 206 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 GADD45AP24522 165 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 CXCR1P25024 350 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 ABCD3P28288 659 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 NR0B1P51843 470 aaKnown RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 GAS1P54826 345 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 VBP1P61758 197 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 RPS4XP62701 263 aaKnown RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 ACTA2P62736 377 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 ACTG2P63267 376 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 RUNX1T1Q06455 604 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 AQP6Q13520 282 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 EXT1Q16394 746 aa11.24□□□□□ -0.61
CHD7-211ENST00000532149 TSTQ16762 297 aaKnown RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 ZNF385CQ66K41 422 aaPredicted RBP11.24□□□□□ -0.61
CHD7-211ENST00000532149 NIPAL3Q6P499 406 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms