RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 SSX8Q7RTT4 187 aa19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 UBE2J2Q8N2K1 259 aa19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 LILRB1Q8NHL6 650 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 SMAP2Q8WU79 429 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 TRMT61AQ96FX7 289 aaKnown RBP19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 TEX37Q96LM6 180 aa19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 TRNT1Q96Q11 434 aaKnown RBP19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 OR52E6Q96RD3 313 aa19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 AIG1Q9NVV5 245 aa19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 HDGFL3Q9Y3E1 203 aa19.72■□□□□ 0.75
TRAPPC4-210ENST00000531290 PRAMEF27A3QJZ7 478 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 CLDN24A6NM45 220 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 PGRP06401 933 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 ALDOCP09972 364 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 GGT1P19440 569 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 HTR3AP46098 478 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 BSPH1Q075Z2 132 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 GNA13Q14344 377 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 PPA1Q15181 289 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 P2RY8Q86VZ1 359 aa19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 GTPBP3Q969Y2 492 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 MTHFD2LQ9H903 347 aaPredicted RBP19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 NOSIPQ9Y314 301 aaKnown RBP19.71■□□□□ 0.75
TRAPPC4-210ENST00000531290 IGKV3D-15A0A087WSY6 115 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 DPRXA6NFQ7 191 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 SDHDO14521 159 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 GPR171O14626 319 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 HDAC3O15379 428 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 SNNO75324 88 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 PMS2P2O95744 297 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 KITP10721 976 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 H2AFXP16104 143 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 CCNA2P20248 432 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 IGHV1-2P23083 117 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 EDNRAP25101 427 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 OR2B6P58173 313 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 SYPL1Q16563 259 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 ZNF672Q499Z4 452 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 TIMM23BQ5SRD1 257 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 LRRC74BQ6ZQY2 392 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 ADGRG3Q86Y34 549 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 CMIPQ8IY22 773 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 ANKFN1Q8N957 763 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 PIGXQ8TBF5 258 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 DYDC1Q8WWB3 177 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 CNOT9Q92600 299 aaKnown RBP19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 DNAJA3Q96EY1 480 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 ARL5BQ96KC2 179 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 INPP5KQ9BT40 448 aa19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 WDR55Q9H6Y2 383 aaPredicted RBP19.7■□□□□ 0.74
TRAPPC4-210ENST00000531290 NAV3Q8IVL0 2385 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 GOLGA8QA0A0J9YX86 632 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 A0A1W2PP18 115 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 GOLGA8OA6NCC3 632 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 AGAP5A6NIR3 686 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 HMGB1P1B2RPK0 211 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 GOLGA8NF8WBI6 632 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 DNPH1O43598 174 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 C1QCP02747 245 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 GSNP06396 782 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 SOD3P08294 240 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 NR2F1P10589 423 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 EPHA3P29320 983 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 FBXW9Q5XUX1 488 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 ABLIM2Q6H8Q1 611 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 ATG4DQ86TL0 474 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 GLB1L3Q8NCI6 653 aaPredicted RBP19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 NEUROG1Q92886 237 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 APH1AQ96BI3 265 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 OR11A1Q9GZK7 315 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 SLC38A1Q9H2H9 487 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 TMEM181Q9P2C4 612 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 GPR45Q9Y5Y3 372 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 ARID1AO14497 2285 aa19.69■□□□□ 0.74
TRAPPC4-210ENST00000531290 CIB4A0PJX0 185 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 KLF11O14901 512 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 KRT75O95678 551 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 IGHV3-9P01782 118 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 DANCRP0C864 163 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 UQCRBP14927 111 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 IL7RP16871 459 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 COX5AP20674 150 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 PCSK6P29122 969 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 IL12AP29459 219 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 CDKN2CP42773 168 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 MAGEA8P43361 318 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 NXNQ6DKJ4 435 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 ZNF433Q8N7K0 673 aaPredicted RBP19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 KBTBD8Q8NFY9 601 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 PMM1Q92871 262 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 DDIT4LQ96D03 193 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 TRAPPC4Q9Y296 219 aa19.68■□□□□ 0.74
TRAPPC4-210ENST00000531290 ROS1P08922 2347 aa19.67■□□□□ 0.74
TRAPPC4-210ENST00000531290 TMED7-TICAM2A0A0A6YYA0 188 aa19.67■□□□□ 0.74
TRAPPC4-210ENST00000531290 OR5H1A6NKK0 313 aa19.67■□□□□ 0.74
TRAPPC4-210ENST00000531290 CCT8L1PA6NM43 557 aa19.67■□□□□ 0.74
TRAPPC4-210ENST00000531290 ZNF716A6NP11 495 aa19.67■□□□□ 0.74
TRAPPC4-210ENST00000531290 OVOL3O00110 214 aa19.67■□□□□ 0.74
TRAPPC4-210ENST00000531290 RFXANKO14593 260 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms