RNA–Protein interactions for RNA: ENST00000530345.1

NUP98-217, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-217ENST00000530345 POLE3Q9NRF9 147 aa6.53□□□□□ -1.36
NUP98-217ENST00000530345 SIRT3Q9NTG7 399 aaPredicted RBP6.53□□□□□ -1.36
NUP98-217ENST00000530345 UPB1Q9UBR1 384 aa6.53□□□□□ -1.36
NUP98-217ENST00000530345 CHRNA9Q9UGM1 479 aa6.53□□□□□ -1.36
NUP98-217ENST00000530345 ATP6V1HQ9UI12 483 aa6.53□□□□□ -1.36
NUP98-217ENST00000530345 PCDHGB4Q9UN71 923 aa6.53□□□□□ -1.36
NUP98-217ENST00000530345 CCL27Q9Y4X3 112 aa6.53□□□□□ -1.36
NUP98-217ENST00000530345 NOTCH1P46531 2555 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 SLC35F4A4IF30 521 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 ESPNB1AK53 854 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 SCAMP2O15127 329 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 STX11O75558 287 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 H6PDO95479 791 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 CSTAP01040 98 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 CRYAAP02489 173 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 ITGA5P08648 1049 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 TACSTD2P09758 323 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 HOXB1P14653 301 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 SERPINF1P36955 418 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 SRP14P37108 136 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 CCT3P49368 545 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 COMPP49747 757 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 DVL1P1P54792 670 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 FOXA1P55317 472 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 SH3BGRP55822 239 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 SESN3P58005 492 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 ETF1P62495 437 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 RPL38P63173 70 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 CHRNEQ04844 493 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 SPOCK1Q08629 439 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 MERTKQ12866 999 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 TOMM34Q15785 309 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 FAM153CQ494X1 144 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 ZNF385BQ569K4 471 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.52□□□□□ -1.37
NUP98-217ENST00000530345 CASP12Q6UXS9 341 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 TRMT10CQ7L0Y3 403 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 ARIH2OSQ8N7S6 290 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 FAM169BQ8N8A8 192 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 LINC01356Q8N9X3 169 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 FAM71CQ8NEG0 241 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 OR4F15Q8NGB8 312 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 ANP32BQ92688 251 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 TMEM45BQ96B21 275 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 C16orf58Q96GQ5 468 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 PPP3R2Q96LZ3 170 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 TSSK3Q96PN8 268 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 SORCS2Q96PQ0 1159 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 NAA11Q9BSU3 229 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 BHLHE41Q9C0J9 482 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 ADAM19Q9H013 955 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 ZNF442Q9H7R0 627 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 PPCSQ9HAB8 311 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 EXOSC3Q9NQT5 275 aaKnown RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 EXD2Q9NVH0 621 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 GPATCH2Q9NW75 528 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 PSMC3IPQ9P2W1 217 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 TMEFF2Q9UIK5 374 aaPredicted RBP6.52□□□□□ -1.37
NUP98-217ENST00000530345 TRAF6Q9Y4K3 522 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 WNK1Q9H4A3 2382 aa6.52□□□□□ -1.37
NUP98-217ENST00000530345 IGHV4-61A0A0C4DH41 118 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 ATP6V1G2-DDX39BF2Z307 99 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 AZIN1O14977 448 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 LSM1O15116 133 aaKnown RBP6.51□□□□□ -1.37
NUP98-217ENST00000530345 ZNF208O43345 1280 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 OIP5O43482 229 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 AKAP10O43572 662 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 TFPIP10646 304 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 BCKDHAP12694 445 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 UQCRBP14927 111 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 ITGA2P17301 1181 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 PTNP21246 168 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 CFPP27918 469 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 SLC1A3P43003 542 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 LIMS1P48059 325 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 CCT5P48643 541 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 IDH3GP51553 393 aaPredicted RBP6.51□□□□□ -1.37
NUP98-217ENST00000530345 CDH15P55291 814 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 SLC35A1P78382 337 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 TXNL4AP83876 142 aaKnown RBP6.51□□□□□ -1.37
NUP98-217ENST00000530345 H3F3AP84243 136 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 SLC7A5Q01650 507 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 ZSWIM7Q19AV6 140 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 SPDYE7PQ495Y7 208 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 PDZK1Q5T2W1 519 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 ATAD3BQ5T9A4 648 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 LIPMQ5VYY2 423 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 AP1ARQ63HQ0 302 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 REP15Q6BDI9 236 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 ANKRD26P1Q6NSI1 321 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 PAQR6Q6TCH4 344 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 USP43Q70EL4 1123 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 CMIPQ8IY22 773 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 WDR31Q8NA23 367 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 NUP37Q8NFH4 326 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 RFWD2Q8NHY2 731 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 MIPOL1Q8TD10 442 aa6.51□□□□□ -1.37
NUP98-217ENST00000530345 MAGEE2Q8TD90 523 aaPredicted RBP6.51□□□□□ -1.37
NUP98-217ENST00000530345 DDIT4LQ96D03 193 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms