RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 SERINC4A6NH21 518 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 AZIN1O14977 448 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 LSM1O15116 133 aaKnown RBP14.08□□□□□ -0.16
COL16A1-216ENST00000529928 SCAMP2O15127 329 aaKnown RBP14.08□□□□□ -0.16
COL16A1-216ENST00000529928 KIAA0513O60268 411 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 CHEK2O96017 543 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 ITGA5P08648 1049 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 CREB1P16220 341 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 PGCP20142 388 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 SLC16A1P53985 500 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 MERTKQ12866 999 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 SPDYE7PQ495Y7 208 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 GALNTL6Q49A17 601 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 C1orf162Q8NEQ5 155 aaPredicted RBP14.08□□□□□ -0.16
COL16A1-216ENST00000529928 OR5P2Q8WZ92 322 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 C3orf49Q96BT1 292 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 MOAP1Q96BY2 351 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 SDF2Q99470 211 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 GATA5Q9BWX5 397 aaPredicted RBP14.08□□□□□ -0.16
COL16A1-216ENST00000529928 RAB21Q9UL25 225 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 FIS1Q9Y3D6 152 aa14.08□□□□□ -0.16
COL16A1-216ENST00000529928 LOC390937A0A1W2PQ73 354 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 TMEM114B3SHH9 223 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 DNPH1O43598 174 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 CYP7B1O75881 506 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 PMS2P2O95744 297 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 TGFAP01135 160 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 LINC00032P0C843 101 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 TFPIP10646 304 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 BCKDHAP12694 445 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 NTF4P34130 210 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 APOBEC1P41238 236 aaKnown RBP14.07□□□□□ -0.16
COL16A1-216ENST00000529928 SWI5Q1ZZU3 235 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 LSM12Q3MHD2 195 aaKnown RBP14.07□□□□□ -0.16
COL16A1-216ENST00000529928 HOMEZQ8IX15 550 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 RFLNBQ8N5W9 214 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 NATD1Q8N6N6 113 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 WDR31Q8NA23 367 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 OR7A2PQ8NGA2 310 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 SFXN5Q8TD22 340 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 FBXO17Q96EF6 278 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 SORCS2Q96PQ0 1159 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 OR7D2Q96RA2 312 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 TUBB1Q9H4B7 451 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 SLC17A5Q9NRA2 495 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 ACER3Q9NUN7 267 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 ATAD3AQ9NVI7 634 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 SLC17A7Q9P2U7 560 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 DCTN4Q9UJW0 460 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 SVEP1Q4LDE5 3571 aa14.07□□□□□ -0.16
COL16A1-216ENST00000529928 ANK2Q01484 3957 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 IGHV4-61A0A0C4DH41 118 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 ATP6V1G2-DDX39BF2Z307 99 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 PDLIM1O00151 329 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 TCF21O43680 179 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 TYROBPO43914 113 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 CSTAP01040 98 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 UBTFL6P0CB48 400 aaPredicted RBP14.06□□□□□ -0.16
COL16A1-216ENST00000529928 LAMP1P11279 417 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 FKBP2P26885 142 aaKnown RBP14.06□□□□□ -0.16
COL16A1-216ENST00000529928 MAPK1P28482 360 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 MAGEA8P43361 318 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 FOXG1P55316 489 aaPredicted RBP14.06□□□□□ -0.16
COL16A1-216ENST00000529928 SNRPD2P62316 118 aaKnown RBP14.06□□□□□ -0.16
COL16A1-216ENST00000529928 TGFBR3Q03167 851 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 RUNX1T1Q06455 604 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 IFFO1Q0D2I5 559 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 ZNF141Q15928 474 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 CR1LQ2VPA4 569 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 IQCCQ4KMZ1 466 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 BHLHB9Q6PI77 547 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 CCDC63Q8NA47 563 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 ZNF540Q8NDQ6 660 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 OR52E4Q8NGH9 312 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 FOXN4Q96NZ1 517 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 UPB1Q9UBR1 384 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 CHRNA9Q9UGM1 479 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 HDGFL3Q9Y3E1 203 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 DNAJC15Q9Y5T4 150 aa14.06□□□□□ -0.16
COL16A1-216ENST00000529928 DUXAA6NLW8 204 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 ANKRD28O15084 1053 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 TRIM13O60858 407 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 SPAG7O75391 227 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 STX11O75558 287 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 C6orf47O95873 294 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 AK1P00568 194 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 ZNF23P17027 643 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 ALDH3A1P30838 453 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 ARRB2P32121 409 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 ETV4P43268 484 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 CLK1P49759 484 aaKnown RBP14.05□□□□□ -0.16
COL16A1-216ENST00000529928 PRPS1P60891 318 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 GPR68Q15743 365 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 CARTPTQ16568 116 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 MST1LQ2TV78 715 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 KANK2Q63ZY3 851 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 CASP12Q6UXS9 341 aa14.05□□□□□ -0.16
COL16A1-216ENST00000529928 EIF3MQ7L2H7 374 aaKnown RBP14.05□□□□□ -0.16
COL16A1-216ENST00000529928 MEX3DQ86XN8 651 aaKnown RBP14.05□□□□□ -0.16
COL16A1-216ENST00000529928 DDIASQ8IXT1 998 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms