RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PIGWQ7Z7B1 504 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 GTF2IRD2Q86UP8 949 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 TREML1Q86YW5 311 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 SLC30A8Q8IWU4 369 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 DMRTC2Q8IXT2 367 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 CNEP1R1Q8N9A8 125 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 BHLHE22Q8NFJ8 381 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 ROBO4Q8WZ75 1007 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 RCN3Q96D15 328 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 LRRC46Q96FV0 321 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 OR5B2Q96R09 309 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 ECSITQ9BQ95 431 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 GLRX2Q9NS18 164 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 FAM53CQ9NYF3 392 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 FOXD3Q9UJU5 478 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 PACSIN3Q9UKS6 424 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 TMED7Q9Y3B3 224 aa11.34□□□□□ -0.59
CCDC90B-216ENST00000529856 PKDREJQ9NTG1 2253 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 EEF1E1-BLOC1S5C9J1V9 151 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 M0QX08 132 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 EEF1E1O43324 174 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 ZNF208O43345 1280 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 FRS3O43559 492 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 CGAP01215 116 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 CCNA2P20248 432 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 UQCRC1P31930 480 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 PCGF2P35227 344 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 MAP2K6P52564 334 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 DMTNQ08495 405 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 GLIPR1L2Q4G1C9 344 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 VWA1Q6PCB0 445 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 TMPPEQ6ZT21 453 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 FAM214BQ7L5A3 538 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 BTLAQ7Z6A9 289 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 COMTD1Q86VU5 262 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 ARMC8Q8IUR7 673 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 CADM2Q8N3J6 435 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 RNF128Q8TEB7 428 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 REXO5Q96IC2 774 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 GMPPAQ96IJ6 420 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 ZNF583Q96ND8 569 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 GPATCH1Q9BRR8 931 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 PIF1Q9H611 641 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 EFCAB1Q9HAE3 211 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 HDGFL3Q9Y3E1 203 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 CACNA1DQ01668 2161 aa11.33□□□□□ -0.6
CCDC90B-216ENST00000529856 TMEM72A0PK05 275 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 A8MXE2 369 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 SULT2B1O00204 365 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 MSTNO14793 375 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 AIM2O14862 343 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 SS18L1O75177 396 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 PMS2P2O95744 297 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 PLGP00747 810 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 TFPIP10646 304 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 ENPP1P22413 925 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 DIO1P49895 249 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 CSNK2A1P68400 391 aaPredicted RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 SIRPAP78324 504 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 HOXC5Q00444 222 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 RNPS1Q15287 305 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 INTS11Q5TA45 600 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 CCDC80Q76M96 950 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 FCRLAQ7L513 359 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 PATL1Q86TB9 770 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 LUZP2Q86TE4 346 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 MCEMP1Q8IX19 187 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 ZNF295-AS1Q8N0V1 137 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 SLC43A2Q8N370 569 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 CMTM5Q96DZ9 223 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 ARL5BQ96KC2 179 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 RBM24Q9BX46 236 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 OR11A1Q9GZK7 315 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 EVA1AQ9H8M9 152 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 CLEC4AQ9UMR7 237 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 TRAPPC4Q9Y296 219 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 ARL2BPQ9Y2Y0 163 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 CENPEQ02224 2701 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 UNC79Q9P2D8 2635 aa11.32□□□□□ -0.6
CCDC90B-216ENST00000529856 SMNDC1O75940 238 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 PRKD3O94806 890 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 C8BP07358 591 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 CD8BP10966 210 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 PRF1P14222 555 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 CXCR1P25024 350 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 PRDX6P30041 224 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 PEX19P40855 299 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 KCNJ5P48544 419 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 CTBP2P56545 445 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 MYBPHQ13203 477 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 VEZF1Q14119 521 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 DUSP7Q16829 419 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 C8orf82Q6P1X6 216 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 ERICH5Q6P6B1 374 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 HACD2Q6Y1H2 254 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 ARPINQ7Z6K5 226 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 ATG4DQ86TL0 474 aaPredicted RBP11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 KIF18BQ86Y91 864 aa11.31□□□□□ -0.6
CCDC90B-216ENST00000529856 LSMEM1Q8N8F7 131 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms