RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	LCN10	Q6JVE6	187 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	PAQR6	Q6TCH4	344 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF730	Q6ZMV8	503 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	DTX1	Q86Y01	620 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRSS58	Q8IYP2	241 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	HORMAD2	Q8N7B1	307 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	DUSP18	Q8NEJ0	188 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	OR9A2	Q8NGT5	310 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	ELP4	Q96EB1	424 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM19	Q96HH6	336 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF354B	Q96LW1	612 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	TCFL5	Q9UL49	500 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	PCDHGB7	Q9Y5F8	929 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	CLDN16	Q9Y5I7	305 aa		13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	CNOT1	A5YKK6	2376 aa	Known RBP	13.42	□□□□□ -0.26
NR1H3-231	ENST00000529540	SPEG	Q15772	3267 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	TRABD2B	A6NFA1	517 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540		H3BN98	237 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	EMC8	O43402	210 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	SEMA7A	O75326	666 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	KLF7	O75840	302 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	C1QB	P02746	253 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	FGF9	P31371	208 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	DLST	P36957	453 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	CCT3	P49368	545 aa	Known RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	GZMK	P49863	264 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	EFNB1	P98172	346 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	ID2	Q02363	134 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	FAP	Q12884	760 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	COL9A2	Q14055	689 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	SSPN	Q14714	243 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRICKLE4	Q2TBC4	344 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	FLYWCH1	Q4VC44	716 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	C22orf42	Q6IC83	251 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	MZT2B	Q6NZ67	158 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	FAM180B	Q6P0A1	224 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	CD200R1L	Q6Q8B3	271 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM205	Q6UW68	189 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	LAPTM4B	Q86VI4	370 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM163	Q8TC26	289 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	SLC38A5	Q8WUX1	472 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	CTHRC1	Q96CG8	243 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF582	Q96NG8	517 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	IP6K3	Q96PC2	410 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	LPAR4	Q99677	370 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZCCHC3	Q9NUD5	404 aa	Known RBP	13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	NTM	Q9P121	344 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	MSRB2	Q9Y3D2	182 aa		13.41	□□□□□ -0.26
NR1H3-231	ENST00000529540	LINC00854	A0A1B0GVQ3	168 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	C17orf105	B2RV13	164 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ERVH48-1	M5A8F1	160 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRKY	O43930	277 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF780A	O75290	641 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	BCHE	P06276	602 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	FAM157B	P0CG42	384 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MMP11	P24347	488 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ETV1	P50549	477 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZNF750	Q32MQ0	723 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	CCDC58	Q4VC31	144 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	SYT14P1	Q58G82	188 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ZCCHC12	Q6PEW1	402 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM107	Q6UX40	140 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MARCH9	Q86YJ5	346 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	TMEM151B	Q8IW70	566 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	OR2L13	Q8N349	312 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MORN4	Q8NDC4	146 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	TSLP	Q969D9	159 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	NKD1	Q969G9	470 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MED30	Q96HR3	178 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MS4A4E	Q96PG1	132 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	KATNB1	Q9BVA0	655 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	SCNM1	Q9BWG6	230 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	PPP1R3E	Q9H7J1	279 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	DIABLO	Q9NR28	239 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	PNO1	Q9NRX1	252 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	RBFOX1	Q9NWB1	397 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MAT2B	Q9NZL9	334 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	COPS7A	Q9UBW8	275 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	KLK13	Q9UKR3	277 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	SPIN1	Q9Y657	262 aa	Predicted RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	FER1L5	A0AVI2	2057 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	SEC16A	O15027	2179 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	LOC102723996	A0A087X1L8	192 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540		A0A1W2PQ72	361 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540		A0A1W2PRQ8	180 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	TGFBR3L	H3BV60	316 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	ARHGEF9	O43307	516 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	PRAMEF2	O60811	474 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MYL12A	P19105	171 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	GABRA5	P31644	462 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	MC3R	P41968	323 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	CLDN20	P56880	219 aa		13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	RPS25	P62851	125 aa	Known RBP	13.4	□□□□□ -0.26
NR1H3-231	ENST00000529540	HOXC5	Q00444	222 aa		13.4	□□□□□ -0.26

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