RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 ENTPD8Q5MY95 495 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 DEF8Q6ZN54 512 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 TSPYL5Q86VY4 417 aaPredicted RBP12.61□□□□□ -0.39
USF1-209ENST00000529476 DHFR2Q86XF0 187 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 PM20D2Q8IYS1 436 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 EID3Q8N140 333 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 LSMEM1Q8N8F7 131 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 ASB9Q96DX5 294 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 MUC13Q9H3R2 512 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 TMEM27Q9HBJ8 222 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 SERINC1Q9NRX5 453 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 RPS6KB2Q9UBS0 482 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 CHRNA9Q9UGM1 479 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 PRDM4Q9UKN5 801 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 SAMD4AQ9UPU9 718 aaKnown RBP12.61□□□□□ -0.39
USF1-209ENST00000529476 KIAA1549Q9HCM3 1950 aa12.61□□□□□ -0.39
USF1-209ENST00000529476 ITPR2Q14571 2701 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 A0A0J9YW62 118 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 TMEM72A0PK05 275 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 EIF1AYO14602 144 aaKnown RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 ACOT8O14734 319 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 FMO6PO60774 539 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 SEMA7AO75326 666 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 CA7P43166 264 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 CASP6P55212 293 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 CTU2Q2VPK5 515 aaKnown RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 TMEM176BQ3YBM2 270 aaPredicted RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 LCN8Q6JVE9 175 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 C3orf33Q6P1S2 294 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 ASRGL1Q7L266 308 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 ATG4DQ86TL0 474 aaPredicted RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 RPRMLQ8N4K4 120 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 MEIOBQ8N635 442 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 PHF10Q8WUB8 498 aaKnown RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 GEMIN6Q8WXD5 167 aaKnown RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 KLHL15Q96M94 604 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 TUBA1CQ9BQE3 449 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 AMBRA1Q9C0C7 1298 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 OR11A1Q9GZK7 315 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 TP63Q9H3D4 680 aaPredicted RBP12.6□□□□□ -0.39
USF1-209ENST00000529476 STOML1Q9UBI4 398 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 MPDZO75970 2070 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 DOPEY1Q5JWR5 2465 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
USF1-209ENST00000529476 A0A0B4J2E0 115 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 A0A1B0GX12 115 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 TCRBV5S2A0A599 114 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 FIGNL2A6NMB9 653 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 AHRRA9YTQ3 701 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 KDM4EB2RXH2 506 aaPredicted RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 TNFSF11O14788 317 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 WDR1O75083 606 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 THY1P04216 161 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 IFNW1P05000 195 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 TFPIP10646 304 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 CXCR1P25024 350 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 ACVR2AP27037 513 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 YAP1P46937 504 aaKnown RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 CDH12P55289 794 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 TRAP1Q12931 704 aaKnown RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 ACSF3Q4G176 576 aaPredicted RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 ALG10BQ5I7T1 473 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 C1orf185Q5T7R7 199 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 RTL6Q6ICC9 239 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 ULK3Q6PHR2 472 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 PLXDC2Q6UX71 529 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 RNF217Q8TC41 542 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 ADAMTS16Q8TE57 1224 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 DNAJA4Q8WW22 397 aaPredicted RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 DNAJA3Q96EY1 480 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 PYURFQ96I23 114 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 ZNF845Q96IR2 970 aaPredicted RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 ADGRG7Q96K78 797 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 SLC7A8Q9UHI5 535 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 FAM215AQ9Y5M1 114 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 SPIN1Q9Y657 262 aaPredicted RBP12.59□□□□□ -0.39
USF1-209ENST00000529476 ABCA12Q86UK0 2595 aa12.59□□□□□ -0.39
USF1-209ENST00000529476 A0A1W2PNR3 127 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ZC3H12DA2A288 527 aaKnown RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 TRAPPC13A5PLN9 417 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ELOA3DA6NLF2 546 aaPredicted RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 GJE1A6NN92 205 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 CLCA1A8K7I4 914 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 CCL21O00585 134 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ADAMDEC1O15204 470 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ZNF208O43345 1280 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 CXCL13O43927 109 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 LYPD3O95274 346 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 STAMBPO95630 424 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 GABRA1P14867 456 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 EIF1AXP47813 144 aaKnown RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 PIN1Q13526 163 aaPredicted RBP12.58□□□□□ -0.4
USF1-209ENST00000529476 ELOA3BQ3SY89 546 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 SYT14P1Q58G82 188 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 MTX3Q5HYI7 312 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 HBMQ6B0K9 141 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ZNF613Q6PF04 617 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 RPTNQ6XPR3 784 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 ESPNLQ6ZVH7 1005 aa12.58□□□□□ -0.4
USF1-209ENST00000529476 NCCRP1Q6ZVX7 275 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms