RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 HTR1EP28566 365 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 RDXP35241 583 aaKnown RBP2.95□□□□□ -1.94
CTR9-204ENST00000529355 LEPP41159 167 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 RWDD2BP57060 319 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 CCDC173Q0VFZ6 552 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 CCDC152Q4G0S7 254 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 EOGTQ5NDL2 527 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 Q6P435 159 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 BLOC1S2Q6QNY1 142 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 WDR74Q6RFH5 385 aaPredicted RBP2.95□□□□□ -1.94
CTR9-204ENST00000529355 AFTPHQ6ULP2 937 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 RFLNAQ6ZTI6 216 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 ARMCX2Q7L311 632 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 VRK2Q86Y07 508 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 SVOPLQ8N434 492 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 ATP6V0D2Q8N8Y2 350 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 OR9A1PQ8NGU1 263 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 CCDC110Q8TBZ0 833 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 N4BP2L2Q92802 583 aaPredicted RBP2.95□□□□□ -1.94
CTR9-204ENST00000529355 RAB7BQ96AH8 199 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 EDEM2Q9BV94 578 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 VCPKMTQ9H867 229 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 ZDHHC11Q9H8X9 412 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 ELOVL3Q9HB03 270 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 SH2D2AQ9NP31 389 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 RAB18Q9NP72 206 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 PLEKHG1Q9ULL1 1385 aa2.95□□□□□ -1.94
CTR9-204ENST00000529355 ZBED9Q6R2W3 1325 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 EEA1Q15075 1411 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 AKNAQ7Z591 1439 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 A8MUA0 341 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 GFYI3L273 518 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 RS1O15537 224 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 LGI1O95970 557 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 EPB41P11171 864 aaKnown RBP2.94□□□□□ -1.94
CTR9-204ENST00000529355 ATP6V1B2P21281 511 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 CCNCP24863 283 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 HTR2AP28223 471 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 NUDT1P36639 197 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 HLCSP50747 726 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 PRPS1P60891 318 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 TIMM10P62072 90 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 TGFBR3Q03167 851 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 NSUN5P1Q3KNT7 163 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 TTC19Q6DKK2 380 aaPredicted RBP2.94□□□□□ -1.94
CTR9-204ENST00000529355 CCDC137Q6PK04 289 aaKnown RBP2.94□□□□□ -1.94
CTR9-204ENST00000529355 TIFABQ6ZNK6 161 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 CCDC80Q76M96 950 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 ARCQ7LC44 396 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 TPRA1Q86W33 373 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 C6orf223Q8N319 242 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 PDCL2Q8N4E4 241 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 LINC01555Q8NAE3 123 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 NEIL3Q8TAT5 605 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 FAM151AQ8WW52 585 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 RAPGEF5Q92565 580 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 GSDMAQ96QA5 445 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 MBOAT4Q96T53 435 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 SH3GL3Q99963 347 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 NAT10Q9H0A0 1025 aaKnown RBP2.94□□□□□ -1.94
CTR9-204ENST00000529355 SLC17A5Q9NRA2 495 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 DCAF16Q9NXF7 216 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 KIF25Q9UIL4 384 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 CDH10Q9Y6N8 788 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 PLEKHH1Q9ULM0 1364 aa2.94□□□□□ -1.94
CTR9-204ENST00000529355 KANK1Q14678 1352 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 A0A1B0GUS0 222 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 PPIAL4DF5H284 164 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 CPLX1O14810 134 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 MAPK13O15264 365 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 BBOX1O75936 387 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 KRT13P13646 458 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 ZNF32P17041 273 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 RCC1P18754 421 aaPredicted RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 PSMA2P25787 234 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 NMT1P30419 496 aaKnown RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 EIF4EBP2Q13542 120 aaPredicted RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 SYPL1Q16563 259 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 TRIM16LQ309B1 348 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 CCDC122Q5T0U0 273 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 FAM71F2Q6NXP2 309 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 CCDC65Q8IXS2 484 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 OR4D9Q8NGE8 314 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 OR2T34Q8NGX1 318 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 RAET1EQ8TD07 263 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 SPRYD4Q8WW59 207 aaPredicted RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 PELI1Q96FA3 418 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 AMDHD1Q96NU7 426 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 RIT2Q99578 217 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 TSG101Q99816 390 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 ZNF670Q9BS34 389 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 CRACR2AQ9BSW2 395 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 POLR2J2Q9GZM3 115 aaKnown RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 POLR2J3Q9H1A7 115 aaKnown RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 POLE3Q9NRF9 147 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 AIG1Q9NVV5 245 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 TREM2Q9NZC2 230 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 IL36GQ9NZH8 169 aa2.93□□□□□ -1.94
CTR9-204ENST00000529355 ZMAT5Q9UDW3 170 aaKnown RBP2.93□□□□□ -1.94
CTR9-204ENST00000529355 LAMP5Q9UJQ1 280 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms