RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 TMEM164Q5U3C3 297 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 AADACL4Q5VUY2 407 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 YOD1Q5VVQ6 348 aaPredicted RBP10.81□□□□□ -0.68
USF1-208ENST00000528768 ULK3Q6PHR2 472 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 DCDC5Q6ZRR9 648 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 CXXC5Q7LFL8 322 aaKnown RBP10.81□□□□□ -0.68
USF1-208ENST00000528768 DTX1Q86Y01 620 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 KMT5CQ86Y97 462 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SLITRK4Q8IW52 837 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SFTPA2Q8IWL1 248 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 POGLUT1Q8NBL1 392 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 OR8D4Q8NGM9 314 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 BPIFA2Q96DR5 249 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 ART5Q96L15 291 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SAMD8Q96LT4 415 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 LRFN5Q96NI6 719 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 OR1F2PQ96R84 312 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 CNPPD1Q9BV87 410 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 ASPNQ9BXN1 380 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 SYNDIG1Q9H7V2 258 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 HHATLQ9HCP6 504 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 MKKSQ9NPJ1 570 aaPredicted RBP10.81□□□□□ -0.68
USF1-208ENST00000528768 INPP5EQ9NRR6 644 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 TAS2R16Q9NYV7 291 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 TNFRSF10DQ9UBN6 386 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 ZNF223Q9UK11 482 aaPredicted RBP10.81□□□□□ -0.68
USF1-208ENST00000528768 SLC35A3Q9Y2D2 325 aa10.81□□□□□ -0.68
USF1-208ENST00000528768 RP1P56715 2156 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 NBPF19A0A087WUL8 3843 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 ZNF670-ZNF695F2Z2N8 137 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 POLR1CO15160 346 aaPredicted RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 AKAP8O43823 692 aaKnown RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 OR2B3O76000 313 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 GKN3PP0CG01 181 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SAGP10523 405 aaPredicted RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 BMP4P12644 408 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 S1PR1P21453 382 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SLC6A6P31641 620 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SOX18P35713 384 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 GPR3P46089 330 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CD97P48960 835 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 DEFA1P59665 94 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 DEFA3P59666 94 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 DCAF7P61962 342 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 GPLD1P80108 840 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 HSD11B2P80365 405 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 FUT7Q11130 342 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 TPBGQ13641 420 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 ATP1A4Q13733 1029 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 FGFBP1Q14512 234 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SSX1Q16384 188 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 ANKDD1AQ495B1 522 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 PDZK1Q5T2W1 519 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SLC30A6Q6NXT4 461 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SMARCD3Q6STE5 483 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 MED25Q71SY5 747 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 ZNF554Q86TJ5 538 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 PHC2Q8IXK0 858 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SLC35F3Q8IY50 421 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 GPR135Q8IZ08 494 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 MFSD4AQ8N468 514 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 LSMEM1Q8N8F7 131 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 GALNT6Q8NCL4 622 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 OR4Q3Q8NH05 313 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 OR52N1Q8NH53 320 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 OR51Q1Q8NH59 317 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 DNAJA4Q8WW22 397 aaPredicted RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 AP3S1Q92572 193 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 VSTM2LQ96N03 204 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CMKLR1Q99788 373 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 PRSS27Q9BQR3 290 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CENPOQ9BU64 300 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 IFT27Q9BW83 186 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 YIPF2Q9BWQ6 316 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 JAM3Q9BX67 310 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 MROQ9BYG7 248 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 RBCK1Q9BYM8 510 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 OR10A5Q9H207 317 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 OR52D1Q9H346 318 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 UBQLN3Q9H347 655 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CUTCQ9NTM9 273 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 AKAP7Q9P0M2 348 aaPredicted RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 LRIT1Q9P2V4 623 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 PISDQ9UG56 409 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CLEC2DQ9UHP7 191 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SERTAD3Q9UJW9 196 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CBLCQ9ULV8 474 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 EXOGQ9Y2C4 368 aaKnown RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 NTNG1Q9Y2I2 539 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 LOXL2Q9Y4K0 774 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 UGT2A1Q9Y4X1 527 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 CORINQ9Y5Q5 1042 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SPIN1Q9Y657 262 aaPredicted RBP10.8□□□□□ -0.68
USF1-208ENST00000528768 PMF1-BGLAPU3KQ54 211 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 SCN3AQ9NY46 2000 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 NINQ8N4C6 2090 aa10.8□□□□□ -0.68
USF1-208ENST00000528768 ICE1Q9Y2F5 2266 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 NPIPA5A0A0B4J1W7 369 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 A0A0B4J2E0 115 aa10.79□□□□□ -0.68
USF1-208ENST00000528768 A0A1B0GX12 115 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms