RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 YES1P07947 543 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 VIMP08670 466 aaKnown RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 GKN3PP0CG01 181 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 TROVE2P10155 538 aaKnown RBP eCLIP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 NID1P14543 1247 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 PPP3CBP16298 524 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 PPIBP23284 216 aaKnown RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 PSMA4P25789 261 aaKnown RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 TACR3P29371 465 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 HOXC12P31275 282 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 MAGEA8P43361 318 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 RAC3P60763 192 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 DAZAP2Q15038 168 aaPredicted RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 MMEL1Q495T6 779 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 ZNF311Q5JNZ3 666 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 PAMR1Q6UXH9 720 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 CASP12Q6UXS9 341 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 ZNF836Q6ZNA1 936 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 TMPPEQ6ZT21 453 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 CXorf67Q86X51 503 aaPredicted RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 KRT73Q86Y46 540 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 P3H2Q8IVL5 708 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 STEAP2Q8NFT2 490 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 BBS10Q8TAM1 723 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 PIGXQ8TBF5 258 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 CKAP2Q8WWK9 683 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 OIT3Q8WWZ8 545 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 NINJ1Q92982 152 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 KISS1RQ969F8 398 aaPredicted RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 SLC38A1Q9H2H9 487 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 COQ10BQ9H8M1 238 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 NGBQ9NPG2 151 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 EXOSC3Q9NQT5 275 aaKnown RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 UPB1Q9UBR1 384 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 KCNE5Q9UJ90 142 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 CORO2BQ9UQ03 480 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 ZNF443Q9Y2A4 671 aaPredicted RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 NOSIPQ9Y314 301 aaKnown RBP8.1□□□□□ -1.11
CMTM1-210ENST00000528441 IFT52Q9Y366 437 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 TMED7Q9Y3B3 224 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 PCDHB14Q9Y5E9 798 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 CELSR2Q9HCU4 2923 aa8.1□□□□□ -1.11
CMTM1-210ENST00000528441 A0A096LPI6 279 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 A0A0G2JPF8 293 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 AGAP5A6NIR3 686 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 CCT8L1PA6NM43 557 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 HNRNPCL2B2RXH8 293 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 HNRNPCL3B7ZW38 293 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 CLOCKO15516 846 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 HNRNPCL1O60812 293 aaKnown RBP8.09□□□□□ -1.11
CMTM1-210ENST00000528441 ADAP00813 363 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 IGHV3-9P01782 118 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 C1QCP02747 245 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 HRGP04196 525 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 ZCCHC18P0CG32 403 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 HNRNPCL4P0DMR1 293 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 FKBP2P26885 142 aaKnown RBP8.09□□□□□ -1.11
CMTM1-210ENST00000528441 FADDQ13158 208 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 NFYCQ13952 458 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 OR7A5Q15622 319 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 TSC22D1Q15714 1073 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 CYP51A1Q16850 503 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 SLC25A53Q5H9E4 307 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 BEX5Q5H9J7 111 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 NUFIP2Q7Z417 695 aaKnown RBP8.09□□□□□ -1.11
CMTM1-210ENST00000528441 GALNT5Q7Z7M9 940 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 GPAT4Q86UL3 456 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 NFKBIDQ8NI38 313 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 SLC26A7Q8TE54 656 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 PMM1Q92871 262 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 MAL2Q969L2 176 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 ZG16BQ96DA0 208 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 ZNF300Q96RE9 604 aaPredicted RBP8.09□□□□□ -1.11
CMTM1-210ENST00000528441 CCL19Q99731 98 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 SPATA5L1Q9BVQ7 753 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 OR11A1Q9GZK7 315 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 SAP130Q9H0E3 1048 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 PLSCR4Q9NRQ2 329 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 RLIMQ9NVW2 624 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 TMEM181Q9P2C4 612 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 LEF1Q9UJU2 399 aaPredicted RBP8.09□□□□□ -1.11
CMTM1-210ENST00000528441 ANGPT4Q9Y264 503 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 GPR52Q9Y2T5 361 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 HDGFL3Q9Y3E1 203 aa8.09□□□□□ -1.11
CMTM1-210ENST00000528441 ANKRD17O75179 2603 aaKnown RBP8.08□□□□□ -1.12
CMTM1-210ENST00000528441 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 PRAMEF27A3QJZ7 478 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 ELOA3DA6NLF2 546 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-210ENST00000528441 GPR171O14626 319 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 SMAD9O15198 467 aaKnown RBP8.08□□□□□ -1.12
CMTM1-210ENST00000528441 EFNA2O43921 213 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 CYTIPO60759 359 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 SMPD2O60906 423 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 BCAS1O75363 584 aaPredicted RBP8.08□□□□□ -1.12
CMTM1-210ENST00000528441 MRPL33O75394 65 aaKnown RBP8.08□□□□□ -1.12
CMTM1-210ENST00000528441 LYZL6O75951 148 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 AHSA1O95433 338 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 CGAP01215 116 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 FPR1P21462 350 aa8.08□□□□□ -1.12
CMTM1-210ENST00000528441 CRYGSP22914 178 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms