RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 OIT3Q8WWZ8 545 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 ARL5BQ96KC2 179 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 TMEM109Q9BVC6 243 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 NUF2Q9BZD4 464 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 C20orf27Q9GZN8 174 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 CENPHQ9H3R5 247 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 POU2F3Q9UKI9 436 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 HDGFL3Q9Y3E1 203 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 ALPK2Q86TB3 2170 aa19.76■□□□□ 0.75
TRAPPC4-208ENST00000527680 OR5H1A6NKK0 313 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 NDUFS7O75251 213 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 BCAS1O75363 584 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 MRPL33O75394 65 aaKnown RBP19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 PGM3O95394 542 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 CLNS1AP54105 237 aaKnown RBP19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 NME5P56597 212 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 DMTNQ08495 405 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 CASP8Q14790 479 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 SAXO2Q658L1 398 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 FRRS1Q6ZNA5 592 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 ADGRG3Q86Y34 549 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 CCDC103Q8IW40 242 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 PIGXQ8TBF5 258 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 TESCQ96BS2 214 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 NEURL3Q96EH8 262 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 RADILQ96JH8 1075 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 TRAF4Q9BUZ4 470 aaPredicted RBP19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 OR11A1Q9GZK7 315 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 SAP130Q9H0E3 1048 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 KCNK9Q9NPC2 374 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 ASB6Q9NWX5 421 aa19.75■□□□□ 0.75
TRAPPC4-208ENST00000527680 RTTNQ86VV8 2226 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 IGKV3D-15A0A087WSY6 115 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 CLDN24A6NM45 220 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 SHISA9B4DS77 424 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 ADAM11O75078 769 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 CRLF1O75462 422 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 SNUPNO95149 360 aaKnown RBP19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 PMS2P2O95744 297 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 CD8AP01732 235 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 IGHV4-39P01824 125 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 GUSBP08236 651 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 COX5AP20674 150 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 MAGEA8P43361 318 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 CLK1P49759 484 aaKnown RBP19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 ZNF83P51522 516 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 STX3Q13277 289 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 DPY19L1Q2PZI1 675 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 FAM174BQ3ZCQ3 159 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 AGAP6Q5VW22 663 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 SLC22A25Q6T423 547 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 KLHL17Q6TDP4 642 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 TMEM108Q6UXF1 575 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 KIRREL3Q8IZU9 778 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 DEPDC4Q8N2C3 294 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 FAM71CQ8NEG0 241 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 PAIP2Q9BPZ3 127 aaKnown RBP19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 BARX1Q9HBU1 254 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 NPAP1Q9NZP6 1156 aa19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 GDF2Q9UK05 429 aaPredicted RBP19.74■□□□□ 0.75
TRAPPC4-208ENST00000527680 A0A1W2PR80 420 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 ZNF716A6NP11 495 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 TM9SF1O15321 606 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 SSX4O60224 188 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 BGNP21810 368 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 HTR3AP46098 478 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 FUT5Q11128 374 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 ABLIM2Q6H8Q1 611 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 ZNF621Q6ZSS3 439 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 RNF130Q86XS8 419 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 TRIML2Q8N7C3 387 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 CNOT9Q92600 299 aaKnown RBP19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 ZBTB9Q96C00 473 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 PANX1Q96RD7 426 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 RHNO1Q9BSD3 238 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 C1QTNF6Q9BXI9 259 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 TMEM181Q9P2C4 612 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 UPB1Q9UBR1 384 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 ADAM21Q9UKJ8 722 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 MGAT4BQ9UQ53 548 aa19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 HEATR1Q9H583 2144 aaKnown RBP19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 CHD3Q12873 2000 aaKnown RBP19.73■□□□□ 0.75
TRAPPC4-208ENST00000527680 ABCA1O95477 2261 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 TMED7-TICAM2A0A0A6YYA0 188 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 CCDC154A6NI56 674 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 E9PBE3 544 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 HMGN4O00479 90 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 ANXA11P50995 505 aaKnown RBP19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 SYPL1Q16563 259 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 WDR93Q6P2C0 686 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 DDIT4LQ96D03 193 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 ADAD1Q96M93 576 aaKnown RBP19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 SORT1Q99523 831 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 NAA11Q9BSU3 229 aaPredicted RBP19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 EXOSC3Q9NQT5 275 aaKnown RBP19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 YAE1D1Q9NRH1 226 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 PNPOQ9NVS9 261 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 TAS2R16Q9NYV7 291 aa19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.72■□□□□ 0.75
TRAPPC4-208ENST00000527680 BTNL2Q9UIR0 455 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms