RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 NPFFR2Q9Y5X5 522 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 HEATR5BQ9P2D3 2071 aa11.57□□□□□ -0.56
CAPN1-208ENST00000527323 TRBV23OR9-2A0A075B6M9 112 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 A8MUA0 341 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF593O00488 134 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SBK2P0C263 348 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SULT1A3P0DMM9 295 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SULT1A4P0DMN0 295 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ATF4P18848 351 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 HTR4Q13639 388 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 TP53I3Q53FA7 332 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SLC22A10Q63ZE4 541 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 FAM111BQ6SJ93 734 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 THSD4Q6ZMP0 1018 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 MS4A15Q8N5U1 240 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 LSMEM1Q8N8F7 131 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 OR7G2Q8NG99 324 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 OR56B4Q8NH76 319 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 WFIKKN2Q8TEU8 576 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 CDCA3Q99618 268 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 OR10A4Q9H209 315 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 CES1P1Q9UKY3 287 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SPTBP11277 2137 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 TRAV27A0A087WT01 109 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 CENPVL1A0A0U1RR11 272 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 EDDM13A0A1B0GTR0 161 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 OR52A4PA6NMU1 304 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 TSPAN4O14817 238 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 FOSL2P15408 326 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 BLVRAP53004 296 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 PUDPQ08623 228 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ELAVL3Q14576 367 aaKnown RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 CLLU1Q5K131 121 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 MRM1Q6IN84 353 aaKnown RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 KANSL1Q7Z3B3 1105 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SRFBP1Q8NEF9 429 aaKnown RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 TOR1AIP2Q8NFQ8 470 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 THAP4Q8WY91 577 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 TPSD1Q9BZJ3 242 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF436Q9C0F3 470 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ACTR6Q9GZN1 396 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 AUNIPQ9H7T9 357 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 UBE2ZQ9H832 354 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 NPIPA5A0A0B4J1W7 369 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 NPIPA7E9PJI5 369 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 BHLHE40O14503 412 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 NPIPA8P0DM63 369 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 GDNFP39905 211 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 SELENOPP49908 381 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 NRG3P56975 720 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 FXYD6P3P58550 94 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 CRMP1Q14194 572 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 OR1Q1Q15612 314 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 MLF2Q15773 248 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ZIC1Q15915 447 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 MFSD12Q6NUT3 480 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 DGLUCYQ7Z3D6 616 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 FGD2Q7Z6J4 655 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 NRROSQ86YC3 692 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 LNX2Q8N448 690 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 COX14Q96I36 57 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 RBP7Q96R05 134 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 FOXQ1Q9C009 403 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 MBNL1Q9NR56 388 aaKnown RBP11.56□□□□□ -0.56
CAPN1-208ENST00000527323 INPP5EQ9NRR6 644 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 ZMIZ1Q9ULJ6 1067 aa11.56□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3DA0A087WVF3 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3IA0A087WXS9 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3EA0A087X179 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3KA0A087X1G2 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3FA6NER0 549 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3LB9A6J9 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 HYAL3O43820 417 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3HP0C7X1 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 EPXP11678 715 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 CD53P19397 219 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 BMP8BP34820 402 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF85Q03923 595 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM52BQ4KMG9 183 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ZNF542PQ5EBM4 170 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3GQ6DHY5 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3CQ6IPX1 549 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TMEM92Q6UXU6 159 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 WDR88Q6ZMY6 472 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 NLRC3Q7RTR2 1065 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 BMP8AQ7Z5Y6 402 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 SLITRK4Q8IW52 837 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 TBC1D3Q8IZP1 549 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-208ENST00000527323 OR51L1Q8NGJ5 315 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 GCDHQ92947 438 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-208ENST00000527323 HGDQ93099 445 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 KISS1RQ969F8 398 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-208ENST00000527323 BPIFA2Q96DR5 249 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 GSX2Q9BZM3 304 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ADAP2Q9NPF8 381 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 CMC2Q9NRP2 79 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 ABRACLQ9P1F3 81 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 HCN3Q9P1Z3 774 aa11.55□□□□□ -0.56
CAPN1-208ENST00000527323 APOBEC3BQ9UH17 382 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms