RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 UGT2B17O75795 530 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 AK1P00568 194 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 UBTFL6P0CB48 400 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 SRD5A1P18405 259 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 KRT4P19013 534 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 FKBP2P26885 142 aaKnown RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 APOBEC3AP31941 199 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 SLC16A1P53985 500 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 FOXG1P55316 489 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 PCLAFQ15004 111 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 EIF3MQ7L2H7 374 aaKnown RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 KRTCAP2Q8N6L1 136 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 PIGXQ8TBF5 258 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 RHOXF2Q9BQY4 288 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 CCDC106Q9BWC9 280 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 BHLHE41Q9C0J9 482 aaPredicted RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 FKRPQ9H9S5 495 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 MKLN1Q9UL63 735 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 HDGFL3Q9Y3E1 203 aa14.13□□□□□ -0.15
PTPRU-210ENST00000527027 YLPM1P49750 1951 aaKnown RBP14.13□□□□□ -0.15
PTPRU-210ENST00000527027 CENPVL1A0A0U1RR11 272 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 ANKRD28O15084 1053 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 DNPH1O43598 174 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 PMS2P2O95744 297 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 CHRNGP07510 517 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 ITGA5P08648 1049 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 PRPS1L1P21108 318 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 MATN1P21941 496 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 CLK1P49759 484 aaKnown RBP14.12□□□□□ -0.15
PTPRU-210ENST00000527027 RPS26P62854 115 aaKnown RBP14.12□□□□□ -0.15
PTPRU-210ENST00000527027 HBA1P69905 142 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 ARHGAP11BQ3KRB8 267 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 XKR7Q5GH72 579 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 C6orf136Q5SQH8 315 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 IL23RQ5VWK5 629 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 C6orf120Q7Z4R8 191 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 CCDC103Q8IW40 242 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 WDR31Q8NA23 367 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 OR52E4Q8NGH9 312 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 ARL5BQ96KC2 179 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 SERHL2Q9H4I8 314 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 EML4Q9HC35 981 aaKnown RBP14.12□□□□□ -0.15
PTPRU-210ENST00000527027 CTPS2Q9NRF8 586 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 CHRNA9Q9UGM1 479 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 KCNS2Q9ULS6 477 aa14.12□□□□□ -0.15
PTPRU-210ENST00000527027 NUP214P35658 2090 aaPredicted RBP14.11□□□□□ -0.15
PTPRU-210ENST00000527027 LOC100289279A0A1B0GTE1 492 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 VWC2LB2RUY7 222 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 PDLIM1O00151 329 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 HAX1O00165 279 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 NPHS1O60500 1241 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 LY6HO94772 140 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 SHBGP04278 402 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 IGFBP5P24593 272 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 SOAT1P35610 550 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 PGM1P36871 562 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 MAGEA8P43361 318 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 MAPK14Q16539 360 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 ATP6AP1LQ52LC2 224 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 FAM120AOSQ5T036 256 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 C1QTNF12Q5T7M4 302 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 FAM166AQ6J272 317 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 OLIG3Q7RTU3 272 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 RIMKLAQ8IXN7 391 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 C4orf33Q8N1A6 199 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 C17orf78Q8N4C9 275 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 FAM71CQ8NEG0 241 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 ZNF563Q8TA94 476 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 DNAJA3Q96EY1 480 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 C3orf30Q96M34 536 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 C1orf50Q9BV19 199 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 DUSP26Q9BV47 211 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 PPCSQ9HAB8 311 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 SLC17A5Q9NRA2 495 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 EXD2Q9NVH0 621 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 PARPBPQ9NWS1 579 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 TRAPPC4Q9Y296 219 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 AMDHD2Q9Y303 409 aa14.11□□□□□ -0.15
PTPRU-210ENST00000527027 SLC35F4A4IF30 521 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 NDUFS8O00217 210 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 PDLIM4P50479 330 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 OR2B6P58173 313 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 PHC1P78364 1004 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 H3F3AP84243 136 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 TGFBR3Q03167 851 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 GGTLC2Q14390 218 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 SWI5Q1ZZU3 235 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 MST1LQ2TV78 715 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 C9orf135Q5VTT2 229 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 C16orf62Q7Z3J2 963 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 GRINAQ7Z429 371 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 ADGRG3Q86Y34 549 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 FNDC5Q8NAU1 212 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 C1orf162Q8NEQ5 155 aaPredicted RBP14.1□□□□□ -0.15
PTPRU-210ENST00000527027 OIT3Q8WWZ8 545 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 MSI2Q96DH6 328 aaKnown RBP14.1□□□□□ -0.15
PTPRU-210ENST00000527027 OR11A1Q9GZK7 315 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 ZNF350Q9GZX5 532 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 CHODLQ9H9P2 273 aa14.1□□□□□ -0.15
PTPRU-210ENST00000527027 UPB1Q9UBR1 384 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms