RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 P2RX2Q9UBL9 471 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SH3BGRL2Q9UJC5 107 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ZNF229Q9UJW7 825 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 SNX6Q9UNH7 406 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 EXOSC1Q9Y3B2 195 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 MMACHCQ9Y4U1 282 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 ATP8B3O60423 1300 aa1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 DHX29Q7Z478 1369 aaKnown RBP1.05□□□□□ -2.24
ECHDC1-219ENST00000526299 A0A1B0GWJ7 208 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RGSL1A5PLK6 1076 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TM9SF1O15321 606 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CHADO15335 359 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 STX7O15400 261 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 MAGEB3O15480 346 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PPIHO43447 177 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 EFNA2O43921 213 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TBX19O60806 448 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PEX11AO75192 247 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 GUCA1CO95843 209 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 IFNB1P01574 187 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PCCBP05166 539 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CD55P08174 381 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 EPB41P11171 864 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NEFHP12036 1026 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NCF1P14598 390 aaPredicted RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 GCFC2P16383 781 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TSPAN8P19075 237 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CYP2F1P24903 491 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PSMA5P28066 241 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PRDX6P30041 224 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 HOXA9P31269 272 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 OTX2P32243 289 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RDXP35241 583 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 DEKP35659 375 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CD86P42081 329 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 DHPSP49366 369 aaPredicted RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ACADVLP49748 655 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PLK1P53350 603 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NUCB2P80303 420 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 MRPS11P82912 194 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PLOD1Q02809 727 aaPredicted RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RIPPLY1Q0D2K3 151 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 SLC10A7Q0GE19 358 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ATXN7L3Q14CW9 347 aaPredicted RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NSDHLQ15738 373 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CEBPEQ15744 281 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 UBE2V2Q15819 145 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ZNF699Q32M78 642 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CFAP221Q4G0U5 840 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 UTS2BQ765I0 119 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 APTXQ7Z2E3 356 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 DPY19L4Q7Z388 723 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 FAM220AQ7Z4H9 259 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 HSD11B1LQ7Z5J1 315 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ANKRD37Q7Z713 158 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CCDC50Q8IVM0 306 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CLDN19Q8N6F1 224 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 SYT14Q8NB59 555 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 DENND6BQ8NEG7 585 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 STXBP6Q8NFX7 210 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 OR52B4Q8NGK2 314 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 UBALD1Q8TB05 177 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TRMT10AQ8TBZ6 339 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RAET1EQ8TD07 263 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 AENQ8WTP8 325 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RLN3Q8WXF3 142 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 MRPS31Q92665 395 aaKnown RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 FRZBQ92765 325 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TRIM44Q96DX7 344 aaPredicted RBP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TMEM80Q96HE8 168 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 SENP8Q96LD8 212 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CFAP53Q96M91 514 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ARHGDIGQ99819 225 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TUBGCP2Q9BSJ2 902 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 COMMD4Q9H0A8 199 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ZNF385DQ9H6B1 395 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 FAM114A2Q9NRY5 505 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 STARD5Q9NSY2 213 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RNF14Q9UBS8 474 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 TMCC3Q9ULS5 477 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 RPH3ALQ9UNE2 315 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 COPS3Q9UNS2 423 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 B9D1Q9UPM9 204 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NUDCQ9Y266 331 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 WDR45Q9Y484 360 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 OR10H1Q9Y4A9 318 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 MFHAS1Q9Y4C4 1052 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 UBIAD1Q9Y5Z9 338 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 IKBKGQ9Y6K9 419 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ABCC4O15439 1325 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 SF3B1O75533 1304 aaKnown RBP eCLIP1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 ZMYM6O95789 1325 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 MAP3K15Q6ZN16 1313 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 CARMIL1Q5VZK9 1371 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NPC1L1Q9UHC9 1359 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 NCAPD2Q15021 1401 aa1.04□□□□□ -2.24
ECHDC1-219ENST00000526299 PPIAL4EA0A075B759 164 aa1.03□□□□□ -2.24
ECHDC1-219ENST00000526299 A0A0U1RQV5 110 aa1.03□□□□□ -2.24
ECHDC1-219ENST00000526299 MBLAC1A4D2B0 266 aaPredicted RBP1.03□□□□□ -2.24
ECHDC1-219ENST00000526299 RNF222A6NCQ9 220 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms