RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 TNFRSF17Q02223 184 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 HKDC1Q2TB90 917 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 HSDL1Q3SXM5 330 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 BCL7AQ4VC05 210 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 LIN52Q52LA3 116 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 ZRANB3Q5FWF4 1079 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 ACER2Q5QJU3 275 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 RNLSQ5VYX0 342 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 WSCD1Q658N2 575 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 FAM91A1Q658Y4 838 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 RAET1GQ6H3X3 334 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 PYHIN1Q6K0P9 492 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 ZSCAN25Q6NSZ9 544 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 TTC33Q6PID6 262 aaPredicted RBP3.01□□□□□ -1.93
CD44-217ENST00000525348 NPSR1Q6W5P4 371 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 C1orf186Q6ZWK4 172 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 Q71RC1 249 aaPredicted RBP3.01□□□□□ -1.93
CD44-217ENST00000525348 TAS2R42Q7RTR8 314 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 OTOAQ7RTW8 1153 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 MIER3Q7Z3K6 550 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 SETD3Q86TU7 594 aaPredicted RBP3.01□□□□□ -1.93
CD44-217ENST00000525348 VASH2Q86V25 355 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 GID4Q8IVV7 300 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 TUSC5Q8IXB3 177 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 OFCC1Q8IZS5 231 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 PDIK1LQ8N165 341 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 EIF1ADQ8N9N8 165 aaKnown RBP3.01□□□□□ -1.93
CD44-217ENST00000525348 TTC29Q8NA56 475 aaPredicted RBP3.01□□□□□ -1.93
CD44-217ENST00000525348 FNDC5Q8NAU1 212 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 AKR7LQ8NHP1 331 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 GIPC3Q8TF64 312 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 MR1Q95460 341 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 TSSK2Q96PF2 358 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 C12orf57Q99622 126 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 CENPKQ9BS16 269 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 SLC22A4Q9H015 551 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 UBQLN3Q9H347 655 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 DPEP2Q9H4A9 486 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 MOB1AQ9H8S9 216 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 WDR41Q9HAD4 459 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 PARVAQ9NVD7 372 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 ENPP5Q9UJA9 477 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 CDH9Q9ULB4 789 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 NCKAP1Q9Y2A7 1128 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 RBMX2Q9Y388 322 aaKnown RBP3.01□□□□□ -1.93
CD44-217ENST00000525348 PRELID3BQ9Y3B1 194 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 MAD1L1Q9Y6D9 718 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 CHD5Q8TDI0 1954 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 CEP152O94986 1710 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 SETD5Q9C0A6 1442 aa3.01□□□□□ -1.93
CD44-217ENST00000525348 SRCAPQ6ZRS2 3230 aa3□□□□□ -1.93
CD44-217ENST00000525348 NWD1Q149M9 1564 aa3□□□□□ -1.93
CD44-217ENST00000525348 INO80Q9ULG1 1556 aaPredicted RBP3□□□□□ -1.93
CD44-217ENST00000525348 MAST1Q9Y2H9 1570 aa3□□□□□ -1.93
CD44-217ENST00000525348 PFASO15067 1338 aa3□□□□□ -1.93
CD44-217ENST00000525348 SIPA1L2Q9P2F8 1722 aaPredicted RBP3□□□□□ -1.93
CD44-217ENST00000525348 A0A1B0GV90 55 aa3□□□□□ -1.93
CD44-217ENST00000525348 A0A1W2PRV1 198 aa3□□□□□ -1.93
CD44-217ENST00000525348 PQLC2LA1A4F0 135 aa3□□□□□ -1.93
CD44-217ENST00000525348 CFAP73A6NFT4 308 aa3□□□□□ -1.93
CD44-217ENST00000525348 C5orf52A6NGY3 159 aa3□□□□□ -1.93
CD44-217ENST00000525348 FAM47DPA6NHR8 397 aa3□□□□□ -1.93
CD44-217ENST00000525348 SMIM23A6NLE4 172 aa3□□□□□ -1.93
CD44-217ENST00000525348 SIGLEC16A6NMB1 481 aa3□□□□□ -1.93
CD44-217ENST00000525348 ZNF729A6NN14 1252 aaPredicted RBP3□□□□□ -1.93
CD44-217ENST00000525348 EFCAB7A8K855 629 aa3□□□□□ -1.93
CD44-217ENST00000525348 SLC30A4O14863 429 aa3□□□□□ -1.93
CD44-217ENST00000525348 SCAMP2O15127 329 aaKnown RBP3□□□□□ -1.93
CD44-217ENST00000525348 ACOX3O15254 700 aa3□□□□□ -1.93
CD44-217ENST00000525348 DENRO43583 198 aaKnown RBP3□□□□□ -1.93
CD44-217ENST00000525348 CCDC22O60826 627 aa3□□□□□ -1.93
CD44-217ENST00000525348 HSF2BPO75031 334 aa3□□□□□ -1.93
CD44-217ENST00000525348 SH3BGRLO75368 114 aa3□□□□□ -1.93
CD44-217ENST00000525348 VAMP5O95183 116 aa3□□□□□ -1.93
CD44-217ENST00000525348 MBD3O95983 291 aa3□□□□□ -1.93
CD44-217ENST00000525348 MOCS2O96007 188 aaPredicted RBP3□□□□□ -1.93
CD44-217ENST00000525348 EPOP01588 193 aa3□□□□□ -1.93
CD44-217ENST00000525348 IGHG1P01857 330 aa3□□□□□ -1.93
CD44-217ENST00000525348 IFNA16P05015 189 aa3□□□□□ -1.93
CD44-217ENST00000525348 ALPPP05187 535 aa3□□□□□ -1.93
CD44-217ENST00000525348 CRHP06850 196 aa3□□□□□ -1.93
CD44-217ENST00000525348 GSTA1P08263 222 aa3□□□□□ -1.93
CD44-217ENST00000525348 HCKP08631 526 aa3□□□□□ -1.93
CD44-217ENST00000525348 UQCRFS1P1P0C7P4 283 aa3□□□□□ -1.93
CD44-217ENST00000525348 ALPPL2P10696 532 aa3□□□□□ -1.93
CD44-217ENST00000525348 PRPS1L1P21108 318 aa3□□□□□ -1.93
CD44-217ENST00000525348 NT5EP21589 574 aa3□□□□□ -1.93
CD44-217ENST00000525348 OR1E1P30953 314 aa3□□□□□ -1.93
CD44-217ENST00000525348 SRD5A2P31213 254 aa3□□□□□ -1.93
CD44-217ENST00000525348 RORAP35398 523 aa3□□□□□ -1.93
CD44-217ENST00000525348 PRKCIP41743 596 aa3□□□□□ -1.93
CD44-217ENST00000525348 MAGEA1P43355 309 aa3□□□□□ -1.93
CD44-217ENST00000525348 MEOX2P50222 304 aa3□□□□□ -1.93
CD44-217ENST00000525348 CCR4P51679 360 aa3□□□□□ -1.93
CD44-217ENST00000525348 SMSP52788 366 aa3□□□□□ -1.93
CD44-217ENST00000525348 PRMT2P55345 433 aa3□□□□□ -1.93
CD44-217ENST00000525348 BACE1P56817 501 aa3□□□□□ -1.93
CD44-217ENST00000525348 NAA20P61599 178 aa3□□□□□ -1.93
CD44-217ENST00000525348 AP1S1P61966 158 aa3□□□□□ -1.93
CD44-217ENST00000525348 RPL10AP62906 217 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms