RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 ZNF474Q6S9Z5 364 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 DHDDSQ86SQ9 333 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 RETREG3Q86VR2 466 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 VRK2Q86Y07 508 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 KRT73Q86Y46 540 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 MAL2Q969L2 176 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 CGREF1Q99674 301 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 OR10A4Q9H209 315 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 IKZF5Q9H5V7 419 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 SAR1AQ9NR31 198 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 CTPS2Q9NRF8 586 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 RLIMQ9NVW2 624 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 KLHL9Q9P2J3 617 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 CHST2Q9Y4C5 530 aa18.65■□□□□ 0.58
TRAPPC9-215ENST00000524162 BBIP1A8MTZ0 92 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 AP3D1O14617 1153 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 CYTIPO60759 359 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 SMNDC1O75940 238 aaKnown RBP eCLIP18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 CD1EP15812 388 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 ENPP1P22413 925 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 AGTR1P30556 359 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 DIO1P49895 249 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 SIRPAP78324 504 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 MAPRE2Q15555 327 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 ADRM1Q16186 407 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZNF311Q5JNZ3 666 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 WBP2NLQ6ICG8 309 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 HMGN2P46Q86SG4 172 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 STK32CQ86UX6 486 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 SLC30A8Q8IWU4 369 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 OR5B2Q96R09 309 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 NDRG3Q9UGV2 375 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 OSGIN1Q9UJX0 560 aa18.64■□□□□ 0.57
TRAPPC9-215ENST00000524162 TMED7-TICAM2A0A0A6YYA0 188 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 A0A1W2PNR3 127 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 PRORSD1PA6NEY8 169 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 A6NNC1 897 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZNF724A8MTY0 619 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 SULT2B1O00204 365 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 YES1P07947 543 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 SLC6A2P23975 617 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 COPZ1P61923 177 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 RPS26P11Q5JNZ5 115 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 TMEM201Q5SNT2 666 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 DHRS4L2Q6PKH6 230 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 BEND4Q6ZU67 534 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 NET1Q7Z628 596 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 SERPINA11Q86U17 422 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 MTDHQ86UE4 582 aaKnown RBP18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZZZ3Q8IYH5 903 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 C10orf111Q8N326 155 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZNF610Q8N9Z0 462 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 HIPK4Q8NE63 616 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ATP6V1C2Q8NEY4 427 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ABHD3Q8WU67 409 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ROBO4Q8WZ75 1007 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 DDIT4LQ96D03 193 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZHX1-C8orf76Q96EF9 292 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 ZNF607Q96SK3 696 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 SH3GL1Q99961 368 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 OPN3Q9H1Y3 402 aaPredicted RBP18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 TMED7Q9Y3B3 224 aa18.63■□□□□ 0.57
TRAPPC9-215ENST00000524162 IGKV3D-15A0A087WSY6 115 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 C16orf97H3BN30 126 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 SMAD9O15198 467 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 EIF1BO60739 113 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 SERPINB7O75635 380 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 TACR3P29371 465 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 UGT2B10P36537 528 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 H3F3AP84243 136 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 KLF10Q13118 480 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 CYLC2Q14093 348 aaPredicted RBP18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 SCARB2Q14108 478 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 TRMT5Q32P41 509 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 PPP4R4Q6NUP7 873 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 CLIP4Q8N3C7 705 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 C11orf65Q8NCR3 313 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 NFKBIDQ8NI38 313 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 PSD2Q9BQI7 771 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 POTEKPQ9BYX7 375 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 KAT8Q9H7Z6 458 aaKnown RBP18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 C12orf10Q9HB07 376 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 RASSF1Q9NS23 344 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 TMEM181Q9P2C4 612 aa18.62■□□□□ 0.57
TRAPPC9-215ENST00000524162 SH3D21A4FU49 640 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 CNOT4O95628 575 aaKnown RBP18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 POU2F1P14859 743 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 PPP3CBP16298 524 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 CPOXP36551 454 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 PCBP3P57721 371 aaKnown RBP18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 NFYCQ13952 458 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 ABLIM2Q6H8Q1 611 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 LSMEM1Q8N8F7 131 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 C10orf82Q8WW14 230 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 ING1Q9UK53 422 aaPredicted RBP18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 TESMINQ9Y4I5 508 aa18.61■□□□□ 0.57
TRAPPC9-215ENST00000524162 FBP2O00757 339 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 TFPIP10646 304 aa18.6■□□□□ 0.57
TRAPPC9-215ENST00000524162 PSMB1P20618 241 aaKnown RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms