RNA–Protein interactions for RNA: ENST00000523699.5

CDK16-222, Transcript of cyclin dependent kinase 16, human

TSL 5

Gene CDK16, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-222	ENST00000523699	KCNK9	Q9NPC2	374 aa		13.85	□□□□□ -0.19
CDK16-222	ENST00000523699	ASB6	Q9NWX5	421 aa		13.85	□□□□□ -0.19
CDK16-222	ENST00000523699	CISD1	Q9NZ45	108 aa	Known RBP	13.85	□□□□□ -0.19
CDK16-222	ENST00000523699	BTNL2	Q9UIR0	455 aa		13.85	□□□□□ -0.19
CDK16-222	ENST00000523699	POU2F3	Q9UKI9	436 aa		13.85	□□□□□ -0.19
CDK16-222	ENST00000523699	MGAT4B	Q9UQ53	548 aa		13.85	□□□□□ -0.19
CDK16-222	ENST00000523699	RAI1	Q7Z5J4	1906 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	DPRX	A6NFQ7	191 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	RNF223	E7ERA6	249 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	ABCD4	O14678	606 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	MRPL33	O75394	65 aa	Known RBP	13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	RAD51D	O75771	328 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	BGN	P21810	368 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	OR2B6	P58173	313 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	KCNJ10	P78508	379 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	CASP8	Q14790	479 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	NRF1	Q16656	503 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	AGAP6	Q5VW22	663 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	SEZ6L2	Q6UXD5	910 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	CROCCP2	Q86T23	111 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	ATG4D	Q86TL0	474 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	DEPDC4	Q8N2C3	294 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	ZNF75CP	Q92670	426 aa	Predicted RBP	13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	NEUROG1	Q92886	237 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	CCDC115	Q96NT0	180 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	TRNT1	Q96Q11	434 aa	Known RBP	13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	SLCO5A1	Q9H2Y9	848 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	TAS2R16	Q9NYV7	291 aa		13.84	□□□□□ -0.19
CDK16-222	ENST00000523699	ZNF716	A6NP11	495 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	EIF1B	O60739	113 aa	Known RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	SCN2B	O60939	215 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	IGHV3-9	P01782	118 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	CCNA2	P20248	432 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	IDH2	P48735	452 aa	Known RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	POLR2H	P52434	150 aa	Known RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	CHRNE	Q04844	493 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	FUT5	Q11128	374 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	OR7E24	Q6IFN5	339 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	OGFOD2	Q6N063	350 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	CASP12	Q6UXS9	341 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	RNF130	Q86XS8	419 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	WDR60	Q8WVS4	1066 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	PMM1	Q92871	262 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	ADAD1	Q96M93	576 aa	Known RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	SORT1	Q99523	831 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	PAIP2	Q9BPZ3	127 aa	Known RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	NAA11	Q9BSU3	229 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	REG4	Q9BYZ8	158 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	OR11A1	Q9GZK7	315 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	MEAF6	Q9HAF1	191 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	CACYBP	Q9HB71	228 aa	Known RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	PARPBP	Q9NWS1	579 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	TMEM181	Q9P2C4	612 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	MALT1	Q9UDY8	824 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	HAO1	Q9UJM8	370 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	SLC9A8	Q9Y2E8	581 aa		13.83	□□□□□ -0.2
CDK16-222	ENST00000523699		V9GYY5	206 aa	Predicted RBP	13.83	□□□□□ -0.2
CDK16-222	ENST00000523699	CCDC154	A6NI56	674 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	HMGN4	O00479	90 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	RAMP1	O60894	148 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	PGM3	O95394	542 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	DHRS4L1	P0CG22	281 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	EDNRA	P25101	427 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	PTAFR	P25105	342 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	ACVR1B	P36896	505 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	MAP2K6	P52564	334 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	SLC16A1	P53985	500 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	NME5	P56597	212 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	SLC35A1	P78382	337 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	PGGHG	Q32M88	737 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	CEP85L	Q5SZL2	805 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	HHAT	Q5VTY9	493 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	SLC22A25	Q6T423	547 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	LRRC74B	Q6ZQY2	392 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	SPATA19	Q7Z5L4	167 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	HMGN2P46	Q86SG4	172 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	DTX2	Q86UW9	622 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	OR52N5	Q8NH56	324 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	DNAJA3	Q96EY1	480 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	ARL5B	Q96KC2	179 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	OR52E6	Q96RD3	313 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	GRIP2	Q9C0E4	1043 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	C20orf27	Q9GZN8	174 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	AIG1	Q9NVV5	245 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	UPB1	Q9UBR1	384 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	TRAPPC4	Q9Y296	219 aa		13.82	□□□□□ -0.2
CDK16-222	ENST00000523699	TMED7-TICAM2	A0A0A6YYA0	188 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	CFAP73	A6NFT4	308 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	AGAP5	A6NIR3	686 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	CLDN24	A6NM45	220 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	TRPC5OS	A6NMA1	111 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	SHISA9	B4DS77	424 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	ZNF208	O43345	1280 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	BCAS1	O75363	584 aa	Predicted RBP	13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	KRT75	O95678	551 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	IGHV4-39	P01824	125 aa		13.81	□□□□□ -0.2
CDK16-222	ENST00000523699	PGR	P06401	933 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms