RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 ACTL7BQ9Y614 415 aa10.11□□□□□ -0.79
SDCBP-211ENST00000523441 NUP214P35658 2090 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-211ENST00000523441 LOC105371242A0A075B767 164 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 IGKV3D-15A0A087WSY6 115 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 A0A096LPE4 126 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 A0A1W2PPZ6 126 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 B4DSR2 109 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 GPR171O14626 319 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 CRYAAP02489 173 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 ADRA2AP08913 450 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 TACSTD2P09758 323 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 TCN1P20061 433 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-211ENST00000523441 IMPDH1P20839 514 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 EPHA1P21709 976 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 PCMT1P22061 227 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 MAGEA8P43361 318 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 TGFBR3Q03167 851 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 SPATA4Q8NEY3 305 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 OR5D16Q8NGK9 328 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 OR5AK3PQ8NH89 298 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 UBASH3BQ8TF42 649 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 C22orf15Q8WYQ4 148 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 HPS1Q92902 700 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 TMEM186Q96B77 213 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 SLC38A2Q96QD8 506 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 RBM4Q9BWF3 364 aaKnown RBP10.1□□□□□ -0.79
SDCBP-211ENST00000523441 HOXD1Q9GZZ0 328 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 RAB17Q9H0T7 212 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 PIGUQ9H490 435 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 REEP4Q9H6H4 257 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 ACSS3Q9H6R3 686 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 RRAGDQ9NQL2 400 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-211ENST00000523441 SIRT5Q9NXA8 310 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 TREM2Q9NZC2 230 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 FAF1Q9UNN5 650 aaPredicted RBP10.1□□□□□ -0.79
SDCBP-211ENST00000523441 PCDHB14Q9Y5E9 798 aa10.1□□□□□ -0.79
SDCBP-211ENST00000523441 CENPVL1A0A0U1RR11 272 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 ESPNB1AK53 854 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 LGI1O95970 557 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 ADRA2CP18825 462 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 ATP5F1P24539 256 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-211ENST00000523441 GIFP27352 417 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 CALCRP30988 508 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 LCN1P31025 176 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 THBS4P35443 961 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 SOAT1P35610 550 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 PPOXP50336 477 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 SERPINB9P50453 376 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 UBE2NP61088 152 aaKnown RBP10.09□□□□□ -0.79
SDCBP-211ENST00000523441 RPS26P62854 115 aaKnown RBP10.09□□□□□ -0.79
SDCBP-211ENST00000523441 RPL38P63173 70 aaKnown RBP10.09□□□□□ -0.79
SDCBP-211ENST00000523441 GALNTL6Q49A17 601 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 SLC25A53Q5H9E4 307 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 CLEC6AQ6EIG7 209 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 CDK20Q8IZL9 346 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 AURKBQ96GD4 344 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-211ENST00000523441 SLC6A7Q99884 636 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 ACTRT3Q9BYD9 372 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 PLK3Q9H4B4 646 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 GSTO2Q9H4Y5 243 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 TNFRSF12AQ9NP84 129 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 SIRT3Q9NTG7 399 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-211ENST00000523441 USP22Q9UPT9 525 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 STK38LQ9Y2H1 464 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 GRIP1Q9Y3R0 1128 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 PPIAL4AQ9Y536 164 aa10.09□□□□□ -0.79
SDCBP-211ENST00000523441 SERINC4A6NH21 518 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 WNT9BO14905 357 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 EIF4E2O60573 245 aaKnown RBP10.08□□□□□ -0.8
SDCBP-211ENST00000523441 RSL1D1O76021 490 aaKnown RBP10.08□□□□□ -0.8
SDCBP-211ENST00000523441 HSPA4LO95757 839 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 CSTAP01040 98 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 CELA3BP08861 270 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 SDC1P18827 310 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 NPR2P20594 1047 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 MPGP29372 298 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 CCT3P49368 545 aaKnown RBP10.08□□□□□ -0.8
SDCBP-211ENST00000523441 HILS1P60008 231 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 NAAAQ02083 359 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 SCGB2A2Q13296 93 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 SKP2Q13309 424 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 PDK3Q15120 406 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 PRR31Q5SQ13 230 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 ZCCHC12Q6PEW1 402 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 TREML4Q6UXN2 200 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 ZNF771Q7L3S4 317 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-211ENST00000523441 AAED1Q7RTV5 226 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 CLEC4FQ8N1N0 589 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 ZNF786Q8N393 782 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 C17orf78Q8N4C9 275 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 CLDND2Q8NHS1 167 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 DCAKDQ8WVC6 231 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 NEU4Q8WWR8 484 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-211ENST00000523441 TMEM234Q8WY98 164 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 ST8SIA1Q92185 356 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 DUX5Q96PT3 197 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 OR7D2Q96RA2 312 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 STACQ99469 402 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 C1QTNF5Q9BXJ0 243 aa10.08□□□□□ -0.8
SDCBP-211ENST00000523441 DUSP22Q9NRW4 184 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms