RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 CITED4Q96RK1 184 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ELF4Q99607 663 aaPredicted RBP12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 ARID2Q68CP9 1835 aa12.12□□□□□ -0.47
PCDHGB1-201ENST00000523390 SOCS6O14544 535 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 PAPLNO95428 1278 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 F10P00742 488 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 ACSM3Q53FZ2 586 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 NKAPLQ5M9Q1 402 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 ANKRD13BQ86YJ7 626 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 KIAA1958Q8N8K9 716 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 BABAM2Q9NXR7 383 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 UPK1AO00322 258 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 PHYHO14832 338 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 ANKRD28O15084 1053 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 PRKYO43930 277 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 RBBP9O75884 186 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 NID1P14543 1247 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 POU3F4P49335 361 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 AP2S1P53680 142 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 PRAMEF17Q5VTA0 474 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMEM179BQ7Z7N9 219 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 AMER3Q8N944 861 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 TBC1D15Q8TC07 691 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 MUL1Q969V5 352 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR5M11Q96RB7 305 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 LMF1Q96S06 567 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF639Q9UID6 485 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 CACNA1IQ9P0X4 2223 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 MBTPS2O43462 519 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 NSA2O95478 260 aaKnown RBP12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 TMEM176BQ3YBM2 270 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 DCAF12Q5T6F0 453 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 FCAMRQ8WWV6 532 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 CST11Q9H112 138 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 A0A1B0GVC2 190 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 A6NIN4 97 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 KDM4EB2RXH2 506 aaPredicted RBP12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 GTF2F2P13984 249 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 IDUAP35475 653 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 DAP3P51398 398 aaKnown RBP12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 ISL1P61371 349 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 AKIRIN2Q53H80 203 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 BCL2L15Q5TBC7 163 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC6A19Q695T7 634 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 TCTN3Q6NUS6 607 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 MSRB3Q8IXL7 192 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC7A5P1Q8MH63 180 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 CCDC107Q8WV48 283 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 PMM1Q92871 262 aa12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 MYEF2Q9P2K5 600 aaKnown RBP12.11□□□□□ -0.47
PCDHGB1-201ENST00000523390 KCNE1BA0A087WTH5 132 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 DCDC2BA2VCK2 349 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 LMO7DNF2Z398 122 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 K7EQS6 105 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ARHGAP33O14559 1287 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 SUSD5O60279 629 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 HOXB3P14651 431 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 FAM189A2Q15884 450 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 NKG7Q16617 165 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF181Q2M3W8 571 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLC25A25Q6KCM7 469 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 LRRN1Q6UXK5 716 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 MARCH3Q86UD3 253 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 CA13Q8N1Q1 262 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 FAM71F1Q96KD3 344 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 UBQLN3Q9H347 655 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 UCKL1Q9NWZ5 548 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 EP300Q09472 2414 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 A6NIZ1 184 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 F5H5K5 113 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 GDF1P27539 372 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 TEAD1P28347 426 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 RAP1BP61224 184 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 RAP1AP62834 184 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 EEF1A1P68104 462 aaKnown RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ELAVL1Q15717 326 aaKnown RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ABCA11PQ4W5N1 156 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF613Q6PF04 617 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 TRMT10AQ8TBZ6 339 aaKnown RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF582Q96NG8 517 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 NMNAT3Q96T66 252 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 PCDHGA6Q9Y5G7 932 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 CTDSP2O14595 271 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ALOX12BO75342 701 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 GATBO75879 557 aaKnown RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF432O94892 652 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 FUCA1P04066 466 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 MLLT11Q13015 90 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 SNTB2Q13425 540 aaKnown RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 SLX4IPQ5VYV7 408 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 GPR139Q6DWJ6 353 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 VASNQ6EMK4 673 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 OR7E24Q6IFN5 339 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ZNF793Q6ZN11 406 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ACOT12Q8WYK0 555 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 DUS3LQ96G46 650 aaKnown RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 ARHGAP9Q9BRR9 750 aa12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 GPN2Q9H9Y4 310 aaPredicted RBP12.1□□□□□ -0.47
PCDHGB1-201ENST00000523390 AGAP14A8MT82 685 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms