RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 SNAI1O95863 264 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SNRPAP09012 282 aaKnown RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 HOXD4P09016 255 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 RNF224P0DH78 156 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ATF6P18850 670 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ATP6V1C1P21283 382 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 S100A1P23297 94 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 LMO2P25791 158 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 PRDX6P30041 224 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CASP4P49662 377 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 HSPA2P54652 639 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 DGCR6Q14129 220 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 PIGHQ14442 188 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 USF2Q15853 346 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 PCK2Q16822 640 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SLC5A12Q1EHB4 618 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CCDC153Q494R4 210 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 TEX44Q53QW1 395 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CMPK2Q5EBM0 449 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 XKR4Q5GH76 650 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 TCTEX1D4Q5JR98 221 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SPANXN2Q5MJ10 180 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 EOGTQ5NDL2 527 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 MUC21Q5SSG8 566 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 LEMD1Q68G75 181 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 RTL6Q6ICC9 239 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SLC25A25Q6KCM7 469 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 RFWD3Q6PCD5 774 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CCDC137Q6PK04 289 aaKnown RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 GVQW1Q8N7I0 195 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SNX31Q8N9S9 440 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SUMF1Q8NBK3 374 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 MINDY2Q8NBR6 621 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 NPRL2Q8WTW4 380 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 LZICQ8WZA0 190 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 RAB1CQ92928 201 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 HAVCR1Q96D42 359 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SERAC1Q96JX3 654 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 PRRC1Q96M27 445 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ACCSQ96QU6 501 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CHP1Q99653 195 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 GPA33Q99795 319 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CITED1Q99966 193 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 DCTN5Q9BTE1 182 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 OR51V1Q9H2C8 321 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 DHX33Q9H6R0 707 aaKnown RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 HEXA-AS1Q9H8Q6 139 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 NT5MQ9NPB1 228 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ELOVL2Q9NXB9 296 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 NKIRAS1Q9NYS0 192 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CRLS1Q9UJA2 301 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ZNF229Q9UJW7 825 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 IKZF3Q9UKT9 509 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ENTPD4Q9Y227 616 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 SLC6A5Q9Y345 797 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 CLTCL1P53675 1640 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 ZNF142P52746 1687 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 POLR3AO14802 1390 aaPredicted RBP3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 STRCQ7RTU9 1775 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 HFM1A2PYH4 1435 aa3.61□□□□□ -1.83
CTNNA1-238ENST00000523298 EFCAB6Q5THR3 1501 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 VWDEQ8N2E2 1590 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 ARHGEF35A5YM69 484 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 CYSRT1A8MQ03 144 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 PGRMC1O00264 195 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 PDHXO00330 501 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 SCAMP2O15127 329 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 PHF1O43189 567 aaPredicted RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 GATCO43716 136 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 JAK2O60674 1132 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 CDH16O75309 829 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 WBP4O75554 376 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 CABYRO75952 493 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 RENP00797 406 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 IGHV3-13P01766 116 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 MBP02144 154 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 CAPN1P07384 714 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 SFTPBP07988 381 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 MELTFP08582 738 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 HSMCR30P0CW71 290 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 SLC2A3P11169 496 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 FOLR2P14207 255 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 SHC1P29353 583 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 HMGCLP35914 325 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 KRTAP10-12P60413 245 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 RPL23AP62750 156 aaKnown RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 PLOD1Q02809 727 aaPredicted RBP3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 GLO1Q04760 184 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 LRRC63Q05C16 580 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 PMS2P3Q13401 168 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 MAPK6Q16659 721 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 TMEM41BQ5BJD5 291 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 LDLRAP1Q5SW96 308 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 MLIPQ5VWP3 458 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 LIPKQ5VXJ0 399 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 WSCD1Q658N2 575 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 ADAMTSL5Q6ZMM2 481 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 CDHR3Q6ZTQ4 885 aa3.6□□□□□ -1.83
CTNNA1-238ENST00000523298 FRA10AC1Q70Z53 315 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms