RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SIKE1Q9BRV8 207 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 TMEM79Q9BSE2 394 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 ITPAQ9BY32 194 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CAB39LQ9H9S4 337 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 FOLH1BQ9HBA9 442 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 CBLN4Q9NTU7 201 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 NPAP1Q9NZP6 1156 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 RYR2Q92736 4967 aa5.82□□□□□ -1.48
SDCBP-210ENST00000522843 OR2M5A3KFT3 312 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 TMEM114B3SHH9 223 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SLCO1B7G3V0H7 640 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 NDUFAB1O14561 156 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 TAPBPO15533 448 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 PHGDHO43175 533 aaKnown RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 TMPRSS11DO60235 418 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 FGF4P08620 206 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SLC35E2P0CK97 266 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 APEHP13798 732 aaKnown RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 IMPDH1P20839 514 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 ENPP1P22413 925 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 ATP5F1P24539 256 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SRP14P37108 136 aaKnown RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 EFNA4P52798 201 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SLC16A1P53985 500 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SCAND1P57086 179 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SPOCK1Q08629 439 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 MGAT2Q10469 447 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 BST1Q10588 318 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 STX3Q13277 289 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 BIKQ13323 160 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 P2RY6Q15077 328 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 RAB35Q15286 201 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 FBXO48Q5FWF7 155 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 TECRLQ5HYJ1 363 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 GKAP1Q5VSY0 366 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 AGAP6Q5VW22 663 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 LIPMQ5VYY2 423 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 OR4C11Q6IEV9 310 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 KLC3Q6P597 504 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 DEF8Q6ZN54 512 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 GPR180Q86V85 440 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 C10orf107Q8IVU9 208 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 KIRREL3Q8IZU9 778 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 KRT78Q8N1N4 520 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 LRRC17Q8N6Y2 441 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 FADS6Q8N9I5 356 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SNX31Q8N9S9 440 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 C7orf57Q8NEG2 295 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 STEAP2Q8NFT2 490 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 KCTD4Q8WVF5 259 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 C3orf49Q96BT1 292 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 L3HYPDHQ96EM0 354 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 GMPPAQ96IJ6 420 aaPredicted RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 FOXN4Q96NZ1 517 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 ATOH8Q96SQ7 321 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 PELOQ9BRX2 385 aaKnown RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 TRMOQ9BU70 441 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 TRIM54Q9BYV2 358 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 RTN4RQ9BZR6 473 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 ROGDIQ9GZN7 287 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 NSRP1Q9H0G5 558 aaKnown RBP5.81□□□□□ -1.48
SDCBP-210ENST00000522843 DKKL1Q9UK85 242 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 ASB4Q9Y574 426 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 SPACA6W5XKT8 324 aa5.81□□□□□ -1.48
SDCBP-210ENST00000522843 GOLGA8QA0A0J9YX86 632 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 LRP5LA4QPB2 252 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 GOLGA8OA6NCC3 632 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 SYCE1LA8MT33 242 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 GOLGA8NF8WBI6 632 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 H3BML4 177 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 STX16-NPEPL1H3BU86 382 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 PLPP1O14494 284 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF195O14628 629 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 STX16O14662 325 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ABCD4O14678 606 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 PGRMC2O15173 223 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 TO15178 435 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 SMAD9O15198 467 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 KERAO60938 352 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 NME6O75414 186 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 VIMP08670 466 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 CSF3P09919 207 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 MYL2P10916 166 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ZNF23P17027 643 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 BGNP21810 368 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 AGTR1P30556 359 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 GGT5P36269 586 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 CASP2P42575 452 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 SSR2P43308 183 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 SLC1A6P48664 564 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ARFIP2P53365 341 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 DSCR4P56555 118 aaPredicted RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 EEFSECP57772 596 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 ABCE1P61221 599 aaKnown RBP5.8□□□□□ -1.48
SDCBP-210ENST00000522843 CDKL1Q00532 357 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 TGM3Q08188 693 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 LGALS3BPQ08380 585 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 PLCXD2Q0VAA5 305 aa5.8□□□□□ -1.48
SDCBP-210ENST00000522843 E2F2Q14209 437 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms