RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 INTS9Q9NV88 658 aaKnown RBP19.13■□□□□ 0.65
HOXA3-204ENST00000521401 SLC25A37Q9NYZ2 338 aa19.13■□□□□ 0.65
HOXA3-204ENST00000521401 OSGIN1Q9UJX0 560 aa19.13■□□□□ 0.65
HOXA3-204ENST00000521401 HDGFL3Q9Y3E1 203 aa19.13■□□□□ 0.65
HOXA3-204ENST00000521401 VPS13CQ709C8 3753 aa19.13■□□□□ 0.65
HOXA3-204ENST00000521401 CDHR4A6H8M9 788 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 CFAP73A6NFT4 308 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF724A8MTY0 619 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 PMS2P2O95744 297 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 TFPIP10646 304 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 BMP2P12643 396 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 OR3A2P47893 321 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 CLK1P49759 484 aaKnown RBP19.12■□□□□ 0.65
HOXA3-204ENST00000521401 CRISP3P54108 245 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 STX1BP61266 288 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 CSNK2A1P68400 391 aaPredicted RBP19.12■□□□□ 0.65
HOXA3-204ENST00000521401 GNA13Q14344 377 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 RGNQ15493 299 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 TSC22D1Q15714 1073 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF836Q6ZNA1 936 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 MTDHQ86UE4 582 aaKnown RBP19.12■□□□□ 0.65
HOXA3-204ENST00000521401 TGIF2LYQ8IUE0 185 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 MSRB3Q8IXL7 192 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 DYDC1Q8WWB3 177 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF775Q96BV0 537 aaPredicted RBP19.12■□□□□ 0.65
HOXA3-204ENST00000521401 DNAJA3Q96EY1 480 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 CALML5Q9NZT1 146 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 SLAMF8Q9P0V8 285 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 PRSS50Q9UI38 385 aa19.12■□□□□ 0.65
HOXA3-204ENST00000521401 A0A096LPI6 279 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 TMED7-TICAM2A0A0A6YYA0 188 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.11■□□□□ 0.65
HOXA3-204ENST00000521401 TMEM72A0PK05 275 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 CLIC1O00299 241 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 SASH3O75995 380 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 CCNA2P20248 432 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 FKBP2P26885 142 aaKnown RBP19.11■□□□□ 0.65
HOXA3-204ENST00000521401 TACR3P29371 465 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 ACAA2P42765 397 aaKnown RBP19.11■□□□□ 0.65
HOXA3-204ENST00000521401 SLC1A3P43003 542 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 HTR3AP46098 478 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 POLR2HP52434 150 aaKnown RBP19.11■□□□□ 0.65
HOXA3-204ENST00000521401 PDK3Q15120 406 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 LIN52Q52LA3 116 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 PAGE3Q5JUK9 113 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 LRIF1Q5T3J3 769 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 SFRP5Q5T4F7 317 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 S100PBPQ96BU1 408 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 HDHD5Q9BXW7 423 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 ADAM19Q9H013 955 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 THUMPD1Q9NXG2 353 aaKnown RBP19.11■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF443Q9Y2A4 671 aaPredicted RBP19.11■□□□□ 0.65
HOXA3-204ENST00000521401 TMED7Q9Y3B3 224 aa19.11■□□□□ 0.65
HOXA3-204ENST00000521401 IGKV3D-15A0A087WSY6 115 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF716A6NP11 495 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF208O43345 1280 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 ADAP00813 363 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 GKN3PP0CG01 181 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 ADAM8P78325 824 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 ACKR1Q16570 336 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 BEX5Q5H9J7 111 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 KRTAP1-3Q8IUG1 177 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 C10orf111Q8N326 155 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 CLIP4Q8N3C7 705 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 STEAP2Q8NFT2 490 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 SPDL1Q96EA4 605 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 MAGEB18Q96M61 343 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 BCL2L10Q9HD36 194 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 ARGLU1Q9NWB6 273 aaPredicted RBP19.1■□□□□ 0.65
HOXA3-204ENST00000521401 CCDC167Q9P0B6 97 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 TRAPPC4Q9Y296 219 aa19.1■□□□□ 0.65
HOXA3-204ENST00000521401 A0A0G2JPF8 293 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 ZC3H12DA2A288 527 aaKnown RBP19.09■□□□□ 0.65
HOXA3-204ENST00000521401 HNRNPCL2B2RXH8 293 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 HNRNPCL3B7ZW38 293 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 NR5A2O00482 541 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 DNPH1O43598 174 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 HNRNPCL1O60812 293 aaKnown RBP19.09■□□□□ 0.65
HOXA3-204ENST00000521401 RAMP1O60894 148 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 THBS1P07996 1170 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 HNRNPCL4P0DMR1 293 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 IMPDH2P12268 514 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 NTF4P34130 210 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 ATP4BP51164 291 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 H3F3AP84243 136 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 RNF220Q5VTB9 566 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 ZC3HAV1Q7Z2W4 902 aaKnown RBP19.09■□□□□ 0.65
HOXA3-204ENST00000521401 WFDC8Q8IUA0 241 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 ZNF440Q8IYI8 595 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 GOLGA6L1Q8N7Z2 621 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 STON2Q8WXE9 905 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 MAL2Q969L2 176 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 RSPO3Q9BXY4 272 aaPredicted RBP19.09■□□□□ 0.65
HOXA3-204ENST00000521401 A4GALTQ9NPC4 353 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 TMEM45AQ9NWC5 275 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 BEX4Q9NWD9 120 aaPredicted RBP19.09■□□□□ 0.65
HOXA3-204ENST00000521401 TMEM181Q9P2C4 612 aa19.09■□□□□ 0.65
HOXA3-204ENST00000521401 TRBV5-3A0A0A0MS03 114 aa19.08■□□□□ 0.64
HOXA3-204ENST00000521401 PRG2P13727 222 aa19.08■□□□□ 0.64
HOXA3-204ENST00000521401 CD99P14209 185 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms