RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PAXXQ9BUH6 204 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 SRXN1Q9BYN0 137 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 SPATA7Q9P0W8 599 aa4.03□□□□□ -1.76
HMGB1P46-201ENST00000520062 CLSPNQ9HAW4 1339 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 PPIAL4EA0A075B759 164 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 A0A1W2PPE3 182 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 GOLGA8OA6NCC3 632 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 GOLGA8NF8WBI6 632 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 ATP5LO75964 103 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 CGAP01215 116 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 PPIAL4FP0DN26 164 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 IGLL1P15814 213 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 HMGB2P26583 209 aaKnown RBP4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 GDF1P27539 372 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 PTGDSP41222 190 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 CCNA1P78396 465 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 CUL2Q13617 745 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 LPAL2Q16609 132 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 OR2B11Q5JQS5 317 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 PAGE2BQ5JRK9 111 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 ATAD3CQ5T2N8 411 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 ATL3Q6DD88 541 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 CXCL17Q6UXB2 119 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 BAIAP2L2Q6UXY1 529 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 PAQR7Q86WK9 346 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF485Q8NCK3 441 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 KLHL30-AS1Q8NEE0 82 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 PAQR8Q8TEZ7 354 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 FAM222BQ8WU58 562 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 FGGYQ96C11 551 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 HAVCR1Q96D42 359 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 TCEANC2Q96MN5 208 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 CLCC1Q96S66 551 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 TRIM62Q9BVG3 475 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 CHIAQ9BZP6 476 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 AZI2Q9H6S1 392 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 APOBEC3BQ9UH17 382 aaKnown RBP4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 DCDC2Q9UHG0 476 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 NSD2O96028 1365 aa4.02□□□□□ -1.77
HMGB1P46-201ENST00000520062 IGLV8-61A0A075B6I0 122 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 KIF2AO00139 706 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 HAS3O00219 553 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 WWP2O00308 870 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 RGS16O15492 202 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZNF254O75437 659 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 ERLIN1O75477 346 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 SLITRK3O94933 977 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 SFTPCP11686 197 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 HOXD10P28358 340 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 MDH2P40926 338 aaKnown RBP4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 GYG1P46976 350 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 RIPK4P57078 832 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 RPS14P62263 151 aaKnown RBP4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 PLD1Q13393 1074 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 LRRC36Q1X8D7 754 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 PAMR1Q6UXH9 720 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 GDPD3Q7L5L3 318 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 ECHDC2Q86YB7 292 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 NRMQ8IXM6 262 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 ALLCQ8N6M5 410 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 OR52K2Q8NGK3 314 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 OR13F1Q8NGS4 319 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 CXorf40BQ96DE9 158 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 TIMD4Q96H15 378 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 SEC22AQ96IW7 307 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 NOL4LQ96MY1 436 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 FOXN4Q96NZ1 517 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 KIR2DL4Q99706 377 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 KRTAP2-2Q9BYT5 123 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 GPR61Q9BZJ8 451 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 NIPAL2Q9H841 368 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 ZFP14Q9HCL3 533 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 BFARQ9NZS9 450 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 CACNA1FO60840 1977 aa4.01□□□□□ -1.77
HMGB1P46-201ENST00000520062 IGHV1OR15-1A0A075B7D0 117 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 IGHV7-81A0A0B4J1V7 117 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 A0A1B0GUS0 222 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 BTBD17A6NE02 478 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 CCDC182A6NF36 153 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 VSTM2BA6NLU5 285 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 E9PBE3 544 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 BCL2L11O43521 198 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 WBP4O75554 376 aaKnown RBP4□□□□□ -1.77
HMGB1P46-201ENST00000520062 TOP1P11387 765 aaKnown RBP4□□□□□ -1.77
HMGB1P46-201ENST00000520062 ETS2P15036 469 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 VDAC1P21796 283 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 FASP25445 335 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 ANXA13P27216 316 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 UGT1A3P35503 534 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 OPRD1P41143 372 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 CRYBB2P43320 205 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 PRMT2P55345 433 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 CDK16Q00536 496 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 BST2Q10589 180 aaKnown RBP4□□□□□ -1.77
HMGB1P46-201ENST00000520062 VGLL4Q14135 290 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 GRB7Q14451 532 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 ARL6IP1Q15041 203 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 AANATQ16613 207 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 TCTEX1D4Q5JR98 221 aa4□□□□□ -1.77
HMGB1P46-201ENST00000520062 UTF1Q5T230 341 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms