RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	FAM83F	Q8NEG4	500 aa	Predicted RBP	11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	DCLRE1C	Q96SD1	692 aa	Known RBP	11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	SLC30A2	Q9BRI3	323 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	NUDT22	Q9BRQ3	303 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	ALG8	Q9BVK2	526 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	TPK1	Q9H3S4	243 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	ADGRL4	Q9HBW9	690 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	ASB6	Q9NWX5	421 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	BABAM2	Q9NXR7	383 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	PLEKHB1	Q9UF11	243 aa	Predicted RBP	11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	GSTK1	Q9Y2Q3	226 aa		11.34	□□□□□ -0.59
SPIDR-210	ENST00000519362	IGKV1D-42	A0A075B6H8	117 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	HTR3E	A5X5Y0	456 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	SCD	O00767	359 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	OIP5	O43482	229 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	UTS2	O95399	124 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	IFNG	P01579	166 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	HLA-DPB1	P04440	258 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	SBK2	P0C263	348 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	CLEC2L	P0C7M8	214 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	CLU	P10909	449 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	UBL4A	P11441	157 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	GAL	P22466	123 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	RANBP1	P43487	201 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	ARRB1	P49407	418 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	DCAF7	P61962	342 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	RPS4X	P62701	263 aa	Known RBP	11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	PSPH	P78330	225 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	CDC20	Q12834	499 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	HNRNPA0	Q13151	305 aa	Known RBP	11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	GALE	Q14376	348 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	EBP	Q15125	230 aa	Known RBP	11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	CBLN3	Q6UW01	205 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	MAMSTR	Q6ZN01	415 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	KANSL1	Q7Z3B3	1105 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	LRRC17	Q8N6Y2	441 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	CYB561A3	Q8NBI2	242 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR5M3	Q8NGP4	307 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	ASB15	Q8WXK1	588 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	CCDC74A	Q96AQ1	378 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	ERMAP	Q96PL5	475 aa	Predicted RBP	11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	KATNB1	Q9BVA0	655 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	NUDT9	Q9BW91	350 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR51V1	Q9H2C8	321 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	RERGL	Q9H628	205 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	SP140L	Q9H930	580 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	POLE4	Q9NR33	117 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	FGF21	Q9NSA1	209 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	FBXL4	Q9UKA2	621 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	TRAPPC4	Q9Y296	219 aa		11.33	□□□□□ -0.6
SPIDR-210	ENST00000519362	DAPL1	A0PJW8	107 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	MCIDAS	D6RGH6	385 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	LRRN3	E7EW58	273 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	TOX3	O15405	576 aa	Predicted RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF264	O43296	627 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	REM1	O75628	298 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	HPGD	P15428	266 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	GTF2E2	P29084	291 aa	Known RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	LCN1	P31025	176 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	NSDHL	Q15738	373 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ARHGAP40	Q5TG30	622 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ATG4D	Q86TL0	474 aa	Predicted RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	LAX1	Q8IWV1	398 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	C9orf40	Q8IXQ3	194 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	GATS	Q8NAP1	163 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ATP6V1C2	Q8NEY4	427 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR14A16	Q8NHC5	309 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	PHOSPHO1	Q8TCT1	267 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	LIPH	Q8WWY8	451 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	CEP19	Q96LK0	163 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	DPYSL5	Q9BPU6	564 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	IER2	Q9BTL4	223 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	CCDC32	Q9BV29	185 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	LRRN3	Q9H3W5	708 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	MRTO4	Q9UKD2	239 aa	Known RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ZNF337	Q9Y3M9	751 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362		V9GYH0	126 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	CCDC163	A0A0D9SF12	145 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	C2orf92	A0A1B0GVN3	265 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	GABRP	O00591	440 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	T	O15178	435 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	RGS5	O15539	181 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR7A10	O76100	309 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	PNMT	P11086	282 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	PNLIP	P16233	465 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	HIST1H1C	P16403	213 aa	Known RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	MST1	P26927	711 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	EPHA8	P29322	1005 aa	Predicted RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	HOXA6	P31267	233 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	RPS7	P62081	194 aa	Known RBP	11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	SQSTM1	Q13501	440 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	ISX	Q2M1V0	245 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	C1orf189	Q5VU69	101 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	LYSMD4	Q5XG99	296 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	TMEM71	Q6P5X7	295 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	TSSK4	Q6SA08	328 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	DPY19L2P2	Q6ZN68	376 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	TMEM91	Q6ZNR0	172 aa		11.32	□□□□□ -0.6
SPIDR-210	ENST00000519362	OR10H4	Q8NGA5	316 aa		11.32	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms