RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ZNF527Q8NB42 609 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 ADAMTS17Q8TE56 1095 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 TP53INP1Q96A56 240 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 NACC2Q96BF6 587 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 BPIFA2Q96DR5 249 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 TBC1D23Q9NUY8 699 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 MYOTQ9UBF9 498 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 WARS2Q9UGM6 360 aaKnown RBP13.23□□□□□ -0.29
CLN8-204ENST00000519254 MED31Q9Y3C7 131 aa13.23□□□□□ -0.29
CLN8-204ENST00000519254 ZNF354AO60765 605 aaPredicted RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 ICOSLGO75144 302 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 PRKAR1AP10644 381 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 PIPP12273 146 aaPredicted RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 LCN1P31025 176 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 PEX19P40855 299 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 RBM34P42696 430 aaKnown RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 CLN3Q13286 438 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 SKP2Q13309 424 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 SLC30A6Q6NXT4 461 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 ULK3Q6PHR2 472 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 SLC16A12Q6ZSM3 486 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 ZNF440Q8IYI8 595 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 TMEM163Q8TC26 289 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 BRIX1Q8TDN6 353 aaKnown RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 YIPF6Q96EC8 236 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 SAMD8Q96LT4 415 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 ZNF582Q96NG8 517 aaPredicted RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 ZBTB20Q9HC78 741 aaPredicted RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 NPFFR2Q9Y5X5 522 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 SCDO00767 359 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 ICAM2P13598 275 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 HPGDP15428 266 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 PSMB9P28065 219 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 ANKRD13BQ86YJ7 626 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 PHOSPHO1Q8TCT1 267 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 FCGR1BQ92637 280 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 LRR1Q96L50 414 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 CDCA4Q9BXL8 241 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 RTN4RQ9BZR6 473 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 ENKD1Q9H0I2 346 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 UBQLN3Q9H347 655 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 RPS6KB2Q9UBS0 482 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 IL20RAQ9UHF4 553 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 TMEM5Q9Y2B1 443 aa13.22□□□□□ -0.29
CLN8-204ENST00000519254 RPL36Q9Y3U8 105 aaKnown RBP13.22□□□□□ -0.29
CLN8-204ENST00000519254 ENO4A6NNW6 628 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 AHCYL1O43865 530 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 ITGA10O75578 1167 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 NADKO95544 446 aaPredicted RBP13.21□□□□□ -0.29
CLN8-204ENST00000519254 DBTP11182 482 aaKnown RBP13.21□□□□□ -0.29
CLN8-204ENST00000519254 UBL4AP11441 157 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 FBXW4P57775 412 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 ZNF91Q05481 1191 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 PGGHGQ32M88 737 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 MEDAGQ5VYS4 303 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 CBLN3Q6UW01 205 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 CDK20Q8IZL9 346 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 SIRT6Q8N6T7 355 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 SLC22A8Q8TCC7 542 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 RAB2BQ8WUD1 216 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 C3orf49Q96BT1 292 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 THOC3Q96J01 351 aaKnown RBP13.21□□□□□ -0.29
CLN8-204ENST00000519254 SLC38A2Q96QD8 506 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 OR52D1Q9H346 318 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 CDCP1Q9H5V8 836 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 HHATLQ9HCP6 504 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 EXOSC3Q9NQT5 275 aaKnown RBP13.21□□□□□ -0.29
CLN8-204ENST00000519254 TAS2R16Q9NYV7 291 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 WASF3Q9UPY6 502 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 SIGLEC7Q9Y286 467 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 CARD8Q9Y2G2 431 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 GPR52Q9Y2T5 361 aa13.21□□□□□ -0.29
CLN8-204ENST00000519254 M0R082 166 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 SURF4O15260 269 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 NKX2-8O15522 239 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 ZNF264O43296 627 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 PTP4A3O75365 173 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 PPM1BO75688 479 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 CH25HO95992 272 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 PTHP01270 115 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 SERPINA7P05543 415 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 ADORA3P0DMS8 318 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 WT1P19544 449 aaPredicted RBP13.2□□□□□ -0.3
CLN8-204ENST00000519254 PNLIPRP2P54317 469 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 MLLT10P55197 1068 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 DCAF10Q5QP82 559 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 OR13C2Q8NGS9 318 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 FANK1Q8TC84 345 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 DNAJA4Q8WW22 397 aaPredicted RBP13.2□□□□□ -0.3
CLN8-204ENST00000519254 ZNF524Q96C55 264 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 IP6K3Q96PC2 410 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 RASL10BQ96S79 203 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 KLHDC3Q9BQ90 382 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 A0A087WUJ7 227 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 A0A1W2PPW3 197 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 EFCAB9A8MZ26 197 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 GTPBP1O00178 669 aaKnown RBP13.2□□□□□ -0.3
CLN8-204ENST00000519254 GNB5O14775 395 aa13.2□□□□□ -0.3
CLN8-204ENST00000519254 NOL3O60936 208 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms