RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 ZNF670Q9BS34 389 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 TPK1Q9H3S4 243 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 DHX33Q9H6R0 707 aaKnown RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 ECT2Q9H8V3 914 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 SLC25A22Q9H936 323 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 EML4Q9HC35 981 aaKnown RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 SMPD3Q9NY59 655 aaPredicted RBP1.25□□□□□ -2.21
PCM1-208ENST00000518877 SIGLEC8Q9NYZ4 499 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 RNF6Q9Y252 685 aa1.25□□□□□ -2.21
PCM1-208ENST00000518877 TET2Q6N021 2002 aaPredicted RBP1.24□□□□□ -2.21
PCM1-208ENST00000518877 A6NIZ1 184 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 TOM1L1O75674 476 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 NEBLO76041 1014 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 SLC25A27O95847 323 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 LALBAP00709 142 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 ZNF286BP0CG31 522 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 CLUP10909 449 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 RNH1P13489 461 aaKnown RBP1.24□□□□□ -2.21
PCM1-208ENST00000518877 CRISP2P16562 243 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 TPSB2P20231 275 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 BTCP35070 178 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 STARD6P59095 220 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 RAP1BP61224 184 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 OSTNP61366 133 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 ACTA1P68133 377 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 RIPPLY1Q0D2K3 151 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 GAMTQ14353 236 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 TPSAB1Q15661 275 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 NRF1Q16656 503 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 DEFB116Q30KQ4 102 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 C6orf89Q6UWU4 347 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 APTXQ7Z2E3 356 aaKnown RBP1.24□□□□□ -2.21
PCM1-208ENST00000518877 DPY19L4Q7Z388 723 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 TMEM17Q86X19 198 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 KDM8Q8N371 416 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 SVOPLQ8N434 492 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 KIR3DL3Q8N743 410 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 ZNF709Q8N972 641 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 MSANTD4Q8NCY6 345 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 DUSP18Q8NEJ0 188 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 OR8H1Q8NGG4 311 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 FANK1Q8TC84 345 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 ACER1Q8TDN7 264 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 GIMAP1Q8WWP7 306 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 STARD8Q92502 1023 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 NDRG1Q92597 394 aaKnown RBP1.24□□□□□ -2.21
PCM1-208ENST00000518877 FAM210BQ96KR6 192 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 SLC6A7Q99884 636 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 SLC30A2Q9BRI3 323 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 PELOQ9BRX2 385 aaKnown RBP1.24□□□□□ -2.21
PCM1-208ENST00000518877 RHBGQ9H310 441 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 MEAF6Q9HAF1 191 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 CCL28Q9NRJ3 127 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 RDH8Q9NYR8 311 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 NINJ2Q9NZG7 142 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 OPN4Q9UHM6 478 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 ERVW-1Q9UQF0 538 aa1.24□□□□□ -2.21
PCM1-208ENST00000518877 SPAG9O60271 1321 aaKnown RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 IGHV2-70DA0A0C4DH43 119 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 A0A0U1RQS6 177 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 COLCA2A8K830 154 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 G3V4G9 280 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 AIREO43918 545 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 B4GALT2O60909 372 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 OR4F21O95013 312 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 IGFBP3P17936 291 aaPredicted RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 NPR2P20594 1047 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 CXCR2P25025 360 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 DPP4P27487 766 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 HOXA9P31269 272 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 PTGDSP41222 190 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 TAS2R19P59542 299 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 SELENOTP62341 195 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 CSTF1Q05048 431 aaKnown RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 CHRNB3Q05901 458 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 SF3A2Q15428 464 aaKnown RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 BCL7AQ4VC05 210 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 C12orf60Q5U649 245 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 NIPAL3Q6P499 406 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 PLBD1Q6P4A8 553 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 KIAA1328Q86T90 577 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 RDH10Q8IZV5 341 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 C15orf54Q8N8G6 183 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 CYB561D1Q8N8Q1 229 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 BRSK1Q8TDC3 778 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 RPL3LQ92901 407 aaKnown RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 VPS35Q96QK1 796 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 NRIP2Q9BQI9 281 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 GSDMCQ9BYG8 508 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 OR11A1Q9GZK7 315 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 ING2Q9H160 280 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 C20orf85Q9H1P6 137 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 CDC42EP4Q9H3Q1 356 aaKnown RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 DMAP1Q9NPF5 467 aaPredicted RBP1.23□□□□□ -2.21
PCM1-208ENST00000518877 ZDHHC4Q9NPG8 344 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.23□□□□□ -2.212e-7■■■□□ 15.6
PCM1-208ENST00000518877 DEC1Q9P2X7 70 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 ATXN10Q9UBB4 475 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 GNPTGQ9UJJ9 305 aa1.23□□□□□ -2.21
PCM1-208ENST00000518877 ASF1AQ9Y294 204 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms