RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ZNF311Q5JNZ3 666 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 RNF220Q5VTB9 566 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 KIF18BQ86Y91 864 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 OR6K3Q8NGY3 331 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 FAM222BQ8WU58 562 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 C10orf82Q8WW14 230 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 ANKRD27Q96NW4 1050 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 CGREF1Q99674 301 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 SIKE1Q9BRV8 207 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 SPATA9Q9BWV2 254 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 ADAM19Q9H013 955 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 RAD21L1Q9H4I0 556 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 RABEP2Q9H5N1 569 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 MED4Q9NPJ6 270 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 RASSF1Q9NS23 344 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 KLHL28Q9NXS3 571 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 CALML5Q9NZT1 146 aa11.85□□□□□ -0.51
VEGFA-219ENST00000518824 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 SH3D21A4FU49 640 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 SULT2B1O00204 365 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 FAAHO00519 579 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 ANGPT2O15123 496 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 THBS1P07996 1170 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 POU2F1P14859 743 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 NTF4P34130 210 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 UGT2B10P36537 528 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 POLR2HP52434 150 aaKnown RBP11.84□□□□□ -0.51
VEGFA-219ENST00000518824 IRX1P78414 480 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-219ENST00000518824 NFYCQ13952 458 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 SCARB2Q14108 478 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 DAZAP2Q15038 168 aaPredicted RBP11.84□□□□□ -0.51
VEGFA-219ENST00000518824 EEF1A1P5Q5VTE0 462 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 METTL21CQ5VZV1 264 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 LURAP1LQ8IV03 231 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 CCDC103Q8IW40 242 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 CADM2Q8N3J6 435 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 BBS10Q8TAM1 723 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 PMM1Q92871 262 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 LRRC46Q96FV0 321 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 PSD2Q9BQI7 771 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 KLHL4Q9C0H6 718 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 PIF1Q9H611 641 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 SERINC1Q9NRX5 453 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 USP22Q9UPT9 525 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 EMC9Q9Y3B6 208 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 AKAP6Q13023 2319 aa11.84□□□□□ -0.51
VEGFA-219ENST00000518824 ABCA4P78363 2273 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 C5orf58C9J3I9 102 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 FXYD1O00168 92 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 CYTIPO60759 359 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 PRKD3O94806 890 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 THBDP07204 575 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 HTR2AP28223 471 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 SLC1A3P43003 542 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 KCNJ5P48544 419 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 GZMMP51124 257 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 GYS2P54840 703 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 OR2B6P58173 313 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 DMTNQ08495 405 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 RASGEF1BQ0VAM2 473 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 GNA13Q14344 377 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 LARS2Q15031 903 aaKnown RBP11.83□□□□□ -0.52
VEGFA-219ENST00000518824 RABL3Q5HYI8 236 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 PRAMEF8Q5VWM4 474 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 PRAMEF7Q5VXH5 474 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 REEP3Q6NUK4 255 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 TFAP2EQ6VUC0 442 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 STAC2Q6ZMT1 411 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 ZC3HAV1LQ96H79 300 aaKnown RBP11.83□□□□□ -0.52
VEGFA-219ENST00000518824 POLDIP3Q9BY77 421 aaKnown RBP11.83□□□□□ -0.52
VEGFA-219ENST00000518824 TMEM38AQ9H6F2 299 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 TIGARQ9NQ88 270 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 THUMPD1Q9NXG2 353 aaKnown RBP11.83□□□□□ -0.52
VEGFA-219ENST00000518824 C6orf203Q9P0P8 240 aaPredicted RBP11.83□□□□□ -0.52
VEGFA-219ENST00000518824 ARMCX1Q9P291 453 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 PRSS50Q9UI38 385 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 ITGB1BP2Q9UKP3 347 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 TESMINQ9Y4I5 508 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 SPG11Q96JI7 2443 aa11.83□□□□□ -0.52
VEGFA-219ENST00000518824 LOC100653049A0A140TA62 436 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 TMEM247A6NEH6 219 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 ZNF716A6NP11 495 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 EVPLLA8MZ36 301 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 TPST2O60704 377 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 KRT34O76011 436 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 OPN1SWP03999 348 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 HRGP04196 525 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 YES1P07947 543 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 ETS2P15036 469 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 PPIBP23284 216 aaKnown RBP11.82□□□□□ -0.52
VEGFA-219ENST00000518824 SEC24CP53992 1094 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 RNPS1Q15287 305 aaKnown RBP11.82□□□□□ -0.52
VEGFA-219ENST00000518824 TMEM201Q5SNT2 666 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 REP15Q6BDI9 236 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 ABLIM2Q6H8Q1 611 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 CDH24Q86UP0 819 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 SNX32Q86XE0 403 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 CDC20BQ86Y33 519 aa11.82□□□□□ -0.52
VEGFA-219ENST00000518824 ZNF440Q8IYI8 595 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms