RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 WRAP53Q9BUR4 548 aaKnown RBP2.74□□□□□ -1.97
VPS13B-207ENST00000518569 EDEM2Q9BV94 578 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 NMNAT2Q9BZQ4 307 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 DNTTIP1Q9H147 329 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 BLZF1Q9H2G9 400 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 RGCCQ9H4X1 137 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 SMYD3Q9H7B4 428 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 METTL7AQ9H8H3 244 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 VAT1LQ9HCJ6 419 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 MRPL22Q9NWU5 206 aaKnown RBP2.74□□□□□ -1.97
VPS13B-207ENST00000518569 ABCD2Q9UBJ2 740 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 UXTQ9UBK9 157 aaPredicted RBP2.74□□□□□ -1.97
VPS13B-207ENST00000518569 RSPH14Q9UHP6 348 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 VSIG4Q9Y279 399 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 KIAA0556O60303 1618 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 PARD3Q8TEW0 1356 aa2.74□□□□□ -1.97
VPS13B-207ENST00000518569 POLR1AO95602 1720 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 FER1L5A0AVI2 2057 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CTTNBP2Q8WZ74 1663 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 HCFC1P51610 2035 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 WDR7Q9Y4E6 1490 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 BTBD17A6NE02 478 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 EFCAB7A8K855 629 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 A8MX80 341 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 FAM220BPB1ANY3 271 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SUPT3HB4E1H0 165 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SGK494L7N484 410 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 LCMT2O60294 686 aaKnown RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 DNAJB6O75190 326 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CDH16O75309 829 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 AHSA1O95433 338 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 TGM6O95932 706 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CRYGCP07315 174 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 PLEKP08567 350 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CLTAP09496 248 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SLC35G4P0C7Q5 338 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 STAG3L2P0CL84 134 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CT45A10P0DMU9 189 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 FASP25445 335 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 MAGEA9P43362 315 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SLC11A1P49279 550 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 STK19P49842 368 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 MEOX2P50222 304 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SLC25A1P53007 311 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 STX17P56962 302 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 XRCC4Q13426 336 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 EIF2B1Q14232 305 aaKnown RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 DMC1Q14565 340 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 TATDN3Q17R31 274 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 HNRNPA1L2Q32P51 320 aaKnown RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 USH1GQ495M9 461 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF311Q5JNZ3 666 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 PHYHD1Q5SRE7 291 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SAPCD1Q5SSQ6 148 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 LIPKQ5VXJ0 399 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SCARA5Q6ZMJ2 495 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 EIF3MQ7L2H7 374 aaKnown RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 LUZP2Q86TE4 346 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 ZNF584Q8IVC4 421 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 ST13P4Q8IZP2 240 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CD177Q8N6Q3 437 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 Q8N9G6 341 aaPredicted RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 OR4F17Q8NGA8 305 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 OR9K2Q8NGE7 335 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 OR56B1Q8NGI3 324 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CDC26Q8NHZ8 85 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 WDR36Q8NI36 951 aaKnown RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 RAB3IL1Q8TBN0 382 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 LKAAEAR1Q8TD35 194 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 GTSF1Q8WW33 167 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 PPP1R14BQ96C90 147 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 ELMO2Q96JJ3 720 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 SERAC1Q96JX3 654 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 OR4F4Q96R69 305 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 PAXXQ9BUH6 204 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 TSGA10Q9BZW7 698 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 NDEL1Q9GZM8 345 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 AUNIPQ9H7T9 357 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 FN3KRPQ9HA64 309 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 MEAF6Q9HAF1 191 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 CNOT2Q9NZN8 540 aaKnown RBP2.73□□□□□ -1.97
VPS13B-207ENST00000518569 PRODH2Q9UF12 536 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 STAP1Q9ULZ2 295 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 FZR1Q9UM11 496 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 DDX19BQ9UMR2 479 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 FKBP7Q9Y680 259 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 PTPRGP23470 1445 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 ROCK1Q13464 1354 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 NINLQ9Y2I6 1382 aa2.73□□□□□ -1.97
VPS13B-207ENST00000518569 GRIN2DO15399 1336 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 FANCAO15360 1455 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 AGRNO00468 2067 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 IGHV3-35A0A0C4DH35 117 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 C1orf232A0A0U1RR37 186 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 GOLGA8IPA6NC78 632 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 FBLL1A6NHQ2 334 aaKnown RBP2.72□□□□□ -1.97
VPS13B-207ENST00000518569 TMEM210A6NLX4 147 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 OR52A4PA6NMU1 304 aa2.72□□□□□ -1.97
VPS13B-207ENST00000518569 C12orf71A8MTZ7 269 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms