RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 NUS1Q96E22 293 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 ZNF607Q96SK3 696 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 KLHDC3Q9BQ90 382 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 SPATA16Q9BXB7 569 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 RAB34Q9BZG1 259 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 NANOGQ9H9S0 305 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 ABCB10Q9NRK6 738 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 UFSP2Q9NUQ7 469 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 SIGLEC8Q9NYZ4 499 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 RPS6KB2Q9UBS0 482 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 SNX6Q9UNH7 406 aa2.08□□□□□ -2.08
SKP1-203ENST00000517625 IGHV3OR16-13A0A075B7E8 117 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 IGHV1OR21-1A0A087WYE8 117 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 ABCD4O14678 606 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 GMFGO60234 142 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 ZNF780AO75290 641 aaPredicted RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 ZNF44P15621 663 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 CMA1P23946 247 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 MMP11P24347 488 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 CD1BP29016 333 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 SSR1P43307 286 aaKnown RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 KIR2DS4P43632 304 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 EFNB2P52799 333 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 CRYBB1P53674 252 aaPredicted RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 RIPK4P57078 832 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 NUP107P57740 925 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 RPS8P62241 208 aaKnown RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 SPIBQ01892 262 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 MAP2K1Q02750 393 aaPredicted RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 DPYSL2Q16555 572 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 GGTA1PQ4G0N0 100 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 LRRC23Q53EV4 343 aaPredicted RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 CFAP157Q5JU67 520 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 Q6ZPB1 254 aaPredicted RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 ACOT7LQ6ZUV0 252 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 CCDC80Q76M96 950 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 PPP1R42Q7Z4L9 355 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 NKAPP1Q8N9T2 125 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 STEAP2Q8NFT2 490 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 OR52I1Q8NGK6 324 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 OR56B4Q8NH76 319 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 RSPH1Q8WYR4 309 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 UCN3Q969E3 161 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 TRIM44Q96DX7 344 aaPredicted RBP2.07□□□□□ -2.08
SKP1-203ENST00000517625 PELI1Q96FA3 418 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 COQ2Q96H96 371 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 PGLYRP4Q96LB8 373 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 GAL3ST1Q99999 423 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 NARFLQ9H6Q4 476 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 SLC25A22Q9H936 323 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 SLC17A5Q9NRA2 495 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 AATFQ9NY61 560 aaKnown RBP eCLIP2.07□□□□□ -2.08
SKP1-203ENST00000517625 ASF1AQ9Y294 204 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 UGT2A1Q9Y4X1 527 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 NEUROG3Q9Y4Z2 214 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 CLSPNQ9HAW4 1339 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 PNPLA6Q8IY17 1366 aa2.07□□□□□ -2.08
SKP1-203ENST00000517625 A0A0J9YXY3 114 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 PSMB11A5LHX3 300 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 IDSB3KWA1 339 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 CPLX1O14810 134 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 AP2A1O95782 977 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 KRT6AP02538 564 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 PTMSP20962 102 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 FUT3P21217 361 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 UQCRC2P22695 453 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 PAX7P23759 505 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 HTR1EP28566 365 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 LAP3P28838 519 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 CALCRP30988 508 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 GRIA1P42261 906 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 CUL1Q13616 776 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 CAPRIN1Q14444 709 aaKnown RBP2.06□□□□□ -2.08
SKP1-203ENST00000517625 NSDHLQ15738 373 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 EXOC3L2Q2M3D2 409 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 C1orf220Q5T0J3 134 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 TPGS2Q68CL5 300 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 IL34Q6ZMJ4 242 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 FAM220AQ7Z4H9 259 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 SLC35F2Q8IXU6 374 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 OR10G3Q8NGC4 313 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 BRSK1Q8TDC3 778 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 ST8SIA1Q92185 356 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 PLEKHF1Q96S99 279 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 EDEM2Q9BV94 578 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 PARD6BQ9BYG5 372 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 POLR2J2Q9GZM3 115 aaKnown RBP2.06□□□□□ -2.08
SKP1-203ENST00000517625 POLR2J3Q9H1A7 115 aaKnown RBP2.06□□□□□ -2.08
SKP1-203ENST00000517625 LRRN3Q9H3W5 708 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 PLSCR3Q9NRY6 295 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 SMOXQ9NWM0 555 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 IL36GQ9NZH8 169 aa2.06□□□□□ -2.08
SKP1-203ENST00000517625 CGNQ9P2M7 1197 aaKnown RBP2.06□□□□□ -2.08
SKP1-203ENST00000517625 RPL36Q9Y3U8 105 aaKnown RBP2.06□□□□□ -2.08
SKP1-203ENST00000517625 CACNA1AO00555 2505 aa2.05□□□□□ -2.08
SKP1-203ENST00000517625 C15orf38-AP3S2A0A0A6YYH1 394 aa2.05□□□□□ -2.08
SKP1-203ENST00000517625 LRP5LA4QPB2 252 aa2.05□□□□□ -2.08
SKP1-203ENST00000517625 PCP4L1A6NKN8 68 aa2.05□□□□□ -2.08
SKP1-203ENST00000517625 KIF2AO00139 706 aaPredicted RBP2.05□□□□□ -2.08
SKP1-203ENST00000517625 HIP1O00291 1037 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms