RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 WDR45Q9Y484 360 aa11.43□□□□□ -0.58
PCM1-203ENST00000517545 PRAF2O60831 178 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 KHDRBS3O75525 346 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 STX11O75558 287 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 MAT2AP31153 395 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 MPIP34949 423 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 RPS15P62841 145 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 SNRPNP63162 240 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 MRM1Q6IN84 353 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 ABHD17CQ6PCB6 329 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 ZNF681Q96N22 645 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 POT1Q9NUX5 634 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 SCN3AQ9NY46 2000 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 OR2M5A3KFT3 312 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 GIPP09681 153 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 PSMB10P40306 273 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 NAA10P41227 235 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 TPMTP51580 245 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 TEAD2Q15562 447 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 C2orf68Q2NKX9 166 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 FCRLAQ7L513 359 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 ASPGQ86U10 573 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 MCCC2Q9HCC0 563 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 CXXC1Q9P0U4 656 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 USP36Q9P275 1121 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 GPR160Q9UJ42 338 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 PDCD5O14737 125 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 UCHL1P09936 223 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 UBE2MP61081 183 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 ERVK-21P61565 698 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 PRDX1Q06830 199 aaKnown RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 CDK5R1Q15078 307 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 ZNF433Q8N7K0 673 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 OR2A1Q8NGT9 310 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 THEM6Q8WUY1 208 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 SMIM19Q96E16 107 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 SEMA4CQ9C0C4 833 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 FKRPQ9H9S5 495 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 NOX4Q9NPH5 578 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 KRCC1Q9NPI7 259 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 ZNF275Q9NSD4 429 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 BAIAP2Q9UQB8 552 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 SIGLEC7Q9Y286 467 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.42□□□□□ -0.58
PCM1-203ENST00000517545 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
PCM1-203ENST00000517545 A0A087WV48 116 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 TRAPPC13A5PLN9 417 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 ACOD1A6NK06 481 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 RIIAD1A6NNX1 92 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 PQBP1O60828 265 aaKnown RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 PCDH8O95206 1070 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 IFNGR1P15260 489 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 NDUFS1P28331 727 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 MAZP56270 477 aaKnown RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 OR1Q1Q15612 314 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 LHX8Q68G74 356 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 SPICQ8N5J4 248 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 OR5M1Q8NGP8 315 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 MOAP1Q96BY2 351 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 BPIFA2Q96DR5 249 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 PCBD2Q9H0N5 130 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 TTYH1Q9H313 450 aaPredicted RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 LDAHQ9H6V9 325 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 RABL2AQ9UBK7 228 aaPredicted RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 PFDN2Q9UHV9 154 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 FBXO9Q9UK97 447 aaPredicted RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 SLC35A3Q9Y2D2 325 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 KRBOX1C9JBD0 128 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 PIN1P1O15428 100 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 VEGFDO43915 354 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 ARL6IP5O75915 188 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 C4BPBP20851 252 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 EEF1A1P68104 462 aaKnown RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 ZIC1Q15915 447 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 DUSP5Q16690 384 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 HEPHL1Q6MZM0 1159 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 MFSD12Q6NUT3 480 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 BAIAP2L2Q6UXY1 529 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 C17orf107Q6ZR85 190 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 UBE2Q1Q7Z7E8 422 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 OR4N5Q8IXE1 308 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 OR6V1Q8N148 313 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 BVESQ8NE79 360 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 LRIG1Q96JA1 1093 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 FERD3LQ96RJ6 166 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 ARL6Q9H0F7 186 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 MTHFD2LQ9H903 347 aaPredicted RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 FBXO34Q9NWN3 711 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 KLHL9Q9P2J3 617 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 FXYD6-FXYD2A0A087WZ82 144 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 TRBV2A0A0J9YWF9 115 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 OR6C65A6NJZ3 312 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 IDSB3KWA1 339 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 GABARAPH6UMI1 98 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 CREBL2O60519 120 aaPredicted RBP11.41□□□□□ -0.58
PCM1-203ENST00000517545 KRT33AO76009 404 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 LYPD3O95274 346 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 FGF2P09038 288 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 S100A11P31949 105 aa11.41□□□□□ -0.58
PCM1-203ENST00000517545 PTH2RP49190 550 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms