RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 C16orf62Q7Z3J2 963 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LSRQ86X29 649 aaPredicted RBP13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CCDC103Q8IW40 242 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PSMA8Q8TAA3 256 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PIGXQ8TBF5 258 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PROX1Q92786 737 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FBXO17Q96EF6 278 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 TRMOQ9BU70 441 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 OR11A1Q9GZK7 315 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 NMUR2Q9GZQ4 415 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CTPS2Q9NRF8 586 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ACER3Q9NUN7 267 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 UPB1Q9UBR1 384 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 KCNE5Q9UJ90 142 aa13.37□□□□□ -0.27
CSGALNACT1-204ENST00000517494 IGKV3D-15A0A087WSY6 115 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ZNF716A6NP11 495 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ATP6V1G2-DDX39BF2Z307 99 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ETV2O00321 342 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GPR171O14626 319 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FCMRO60667 390 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 TRIM13O60858 407 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 STX11O75558 287 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SKAP2O75563 359 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SLU7O95391 586 aaKnown RBP13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SHBGP04278 402 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ITGA5P08648 1049 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PDK3Q15120 406 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 GABRA6Q16445 453 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PGS1Q32NB8 556 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FAM120AOSQ5T036 256 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 IL23RQ5VWK5 629 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 HMGN2P46Q86SG4 172 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CNPY4Q8N129 248 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FNDC5Q8NAU1 212 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 UBLCP1Q8WVY7 318 aaPredicted RBP13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ARL5BQ96KC2 179 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SLC35G5Q96KT7 338 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 RHOXF2Q9BQY4 288 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PIMREGQ9BSJ6 248 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 DUSP26Q9BV47 211 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SERHL2Q9H4I8 314 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MALT1Q9UDY8 824 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CHRNA9Q9UGM1 479 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 FKBP7Q9Y680 259 aa13.36□□□□□ -0.27
CSGALNACT1-204ENST00000517494 RNF103-CHMP3A0A140T963 221 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SLC35F4A4IF30 521 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 KIAA0513O60268 411 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 LYPLA1O75608 230 aaPredicted RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 UGT2B17O75795 530 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PMS2P2O95744 297 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 AK1P00568 194 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 APEHP13798 732 aaKnown RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CDH2P19022 906 aaPredicted RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 HNF1AP20823 631 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 NTF4P34130 210 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 APOBEC1P41238 236 aaKnown RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MAGEA8P43361 318 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PDLIM4P50479 330 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 HBA1P69905 142 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PHC1P78364 1004 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ZNF141Q15928 474 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 IQCCQ4KMZ1 466 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 KLHL24Q6TFL4 600 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 C6orf120Q7Z4R8 191 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CLECL1Q8IZS7 167 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 NATD1Q8N6N6 113 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 EPS8L3Q8TE67 593 aaKnown RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MUS81Q96NY9 551 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 TXLNGYQ9BZA5 131 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 BHLHE41Q9C0J9 482 aaPredicted RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 EML4Q9HC35 981 aaKnown RBP13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 AMDHD2Q9Y303 409 aa13.35□□□□□ -0.27
CSGALNACT1-204ENST00000517494 DUXAA6NLW8 204 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ANKRD28O15084 1053 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 BCAS1O75363 584 aaPredicted RBP13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 PRPS1L1P21108 318 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 APOBEC3AP31941 199 aaPredicted RBP13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 UGT3A2Q3SY77 523 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 ZCCHC23Q6ZST2 131 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 WDR31Q8NA23 367 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 COQ8BQ96D53 544 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MSI2Q96DH6 328 aaKnown RBP13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 VRK1Q99986 396 aaPredicted RBP13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MECRQ9BV79 373 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 CCDC106Q9BWC9 280 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 OR51I1Q9H343 314 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 SLC17A5Q9NRA2 495 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 EXD2Q9NVH0 621 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 MOKQ9UQ07 419 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 HDGFL3Q9Y3E1 203 aa13.34□□□□□ -0.27
CSGALNACT1-204ENST00000517494 DNAJA2O60884 412 aa13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 FGF4P08620 206 aa13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 ALDH3A1P30838 453 aa13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 NR4A2P43354 598 aa13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 SNRPD2P62316 118 aaKnown RBP13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 TGFBR3Q03167 851 aa13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 MAPK14Q16539 360 aa13.33□□□□□ -0.28
CSGALNACT1-204ENST00000517494 ARHGAP11BQ3KRB8 267 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms