RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 CHRNA9Q9UGM1 479 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 OSGIN1Q9UJX0 560 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 ZNF443Q9Y2A4 671 aaPredicted RBP10.23□□□□□ -0.77
VCAN-212ENST00000515397 TMED7Q9Y3B3 224 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 TESMINQ9Y4I5 508 aa10.23□□□□□ -0.77
VCAN-212ENST00000515397 IGHV3-9P01782 118 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 THBDP07204 575 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 YES1P07947 543 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 PABPC4LP0CB38 370 aaKnown RBP10.22□□□□□ -0.77
VCAN-212ENST00000515397 IMPDH2P12268 514 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 AQP1P29972 269 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 ATP4BP51164 291 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 ART1P52961 327 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 TXNL4AP83876 142 aaKnown RBP10.22□□□□□ -0.77
VCAN-212ENST00000515397 GUCY1A3Q02108 690 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 SELPLGQ14242 412 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 GNA13Q14344 377 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 LIN52Q52LA3 116 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 ZNF311Q5JNZ3 666 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 LRIF1Q5T3J3 769 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 CGB2Q6NT52 195 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 DLEU7Q6UYE1 221 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 SERPINA11Q86U17 422 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 COMTD1Q86VU5 262 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 CXorf67Q86X51 503 aaPredicted RBP10.22□□□□□ -0.77
VCAN-212ENST00000515397 PIK3IP1Q96FE7 263 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 HS3ST6Q96QI5 342 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 PIF1Q9H611 641 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 ZNF385DQ9H6B1 395 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 EXOSC3Q9NQT5 275 aaKnown RBP10.22□□□□□ -0.77
VCAN-212ENST00000515397 PRSS50Q9UI38 385 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 DSPPQ9NZW4 1301 aa10.22□□□□□ -0.77
VCAN-212ENST00000515397 ITPR3Q14573 2671 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 MTORP42345 2549 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 A0A0G2JPF8 293 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 A0A1W2PP18 115 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 CDHR4A6H8M9 788 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 TMEM247A6NEH6 219 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 DEFB108AA8MXU0 73 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 HNRNPCL2B2RXH8 293 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 HNRNPCL3B7ZW38 293 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 C5orf58C9J3I9 102 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 TPST1O60507 370 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 HNRNPCL1O60812 293 aaKnown RBP10.21□□□□□ -0.77
VCAN-212ENST00000515397 PGM3O95394 542 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 ADAP00813 363 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 VIMP08670 466 aaKnown RBP10.21□□□□□ -0.77
VCAN-212ENST00000515397 HNRNPCL4P0DMR1 293 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 NTF4P34130 210 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 SLC1A3P43003 542 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 POLR2HP52434 150 aaKnown RBP10.21□□□□□ -0.77
VCAN-212ENST00000515397 CAPRIN1Q14444 709 aaKnown RBP10.21□□□□□ -0.77
VCAN-212ENST00000515397 RNPS1Q15287 305 aaKnown RBP10.21□□□□□ -0.77
VCAN-212ENST00000515397 GLIPR1L2Q4G1C9 344 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 GCNT6Q5T4J0 391 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 TFAP2EQ6VUC0 442 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 MTDHQ86UE4 582 aaKnown RBP10.21□□□□□ -0.77
VCAN-212ENST00000515397 WFDC8Q8IUA0 241 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 CMIPQ8IY22 773 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 PSD2Q9BQI7 771 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 WFDC6Q9BQY6 131 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 ADAM19Q9H013 955 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 PLEKHF2Q9H8W4 249 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 A4GALTQ9NPC4 353 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 GLRX2Q9NS18 164 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 CALML5Q9NZT1 146 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 ST6GALNAC2Q9UJ37 374 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 ZNF232Q9UNY5 417 aa10.21□□□□□ -0.77
VCAN-212ENST00000515397 CELSR1Q9NYQ6 3014 aa10.21□□□□□ -0.78
VCAN-212ENST00000515397 ACANP16112 2415 aa10.21□□□□□ -0.78
VCAN-212ENST00000515397 TRBV5-3A0A0A0MS03 114 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 CYTIPO60759 359 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 PTNP21246 168 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 FPR1P21462 350 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 MTPNP58546 118 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 CSNK2A1P68400 391 aaPredicted RBP10.2□□□□□ -0.78
VCAN-212ENST00000515397 CDK6Q00534 326 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 LARS2Q15031 903 aaKnown RBP10.2□□□□□ -0.78
VCAN-212ENST00000515397 TESK1Q15569 626 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 ADRM1Q16186 407 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 RUNDC3AQ59EK9 446 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 BEND4Q6ZU67 534 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 DHDDSQ86SQ9 333 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 STK32CQ86UX6 486 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 P3H2Q8IVL5 708 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 SLC43A2Q8N370 569 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 S100PBPQ96BU1 408 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 CPPED1Q9BRF8 314 aaPredicted RBP10.2□□□□□ -0.78
VCAN-212ENST00000515397 SPATA9Q9BWV2 254 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 ACTR6Q9GZN1 396 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 KLHL9Q9P2J3 617 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 LEF1Q9UJU2 399 aaPredicted RBP10.2□□□□□ -0.78
VCAN-212ENST00000515397 NDUFAF1Q9Y375 327 aa10.2□□□□□ -0.78
VCAN-212ENST00000515397 SPIN1Q9Y657 262 aaPredicted RBP10.2□□□□□ -0.78
VCAN-212ENST00000515397 EVPLLA8MZ36 301 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 FBP2O00757 339 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 KLF4O43474 513 aa10.19□□□□□ -0.78
VCAN-212ENST00000515397 GCM2O75603 506 aaPredicted RBP10.19□□□□□ -0.78
VCAN-212ENST00000515397 LYZL6O75951 148 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms