RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 PRSS27Q9BQR3 290 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 ZNF426Q9BUY5 554 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 EXO5Q9H790 373 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 MAN2C1Q9NTJ4 1040 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 SLC6A5Q9Y345 797 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 DNAJC13O75165 2243 aa18.94■□□□□ 0.62
LSM6-207ENST00000515311 COL6A6A6NMZ7 2263 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 OR14I1A6ND48 311 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 ADAMDEC1O15204 470 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 KRT36O76013 467 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 FCGR1AP12314 374 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 IL11P20809 199 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 RBM34P42696 430 aaKnown RBP18.93■□□□□ 0.62
LSM6-207ENST00000515311 CLK1P49759 484 aaKnown RBP18.93■□□□□ 0.62
LSM6-207ENST00000515311 BCL2A1Q16548 175 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 LILRA2Q8N149 483 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 GHDCQ8N2G8 530 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 ABTB1Q969K4 478 aaPredicted RBP18.93■□□□□ 0.62
LSM6-207ENST00000515311 BBC3Q96PG8 261 aaPredicted RBP18.93■□□□□ 0.62
LSM6-207ENST00000515311 TMEM43Q9BTV4 400 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 SPRR3Q9UBC9 169 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 RHCGQ9UBD6 479 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 TESMINQ9Y4I5 508 aa18.93■□□□□ 0.62
LSM6-207ENST00000515311 GJE1A6NN92 205 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 H3BML4 177 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 H3BNX3 289 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 TIPRLO75663 272 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 WISP2O76076 250 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 CST1P01037 141 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 PEPDP12955 493 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 BMP7P18075 431 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 POU3F2P20265 443 aaPredicted RBP18.92■□□□□ 0.62
LSM6-207ENST00000515311 RRM2P31350 389 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 SPIBQ01892 262 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 CRYZQ08257 329 aaKnown RBP18.92■□□□□ 0.62
LSM6-207ENST00000515311 GK3PQ14409 553 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 C5orf46Q6UWT4 87 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 WDR88Q6ZMY6 472 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 RNF217Q8TC41 542 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 HS6ST2Q96MM7 605 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 SLC19A3Q9BZV2 496 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 DNAJB9Q9UBS3 223 aa18.92■□□□□ 0.62
LSM6-207ENST00000515311 MPDZO75970 2070 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 SPENQ96T58 3664 aaKnown RBP18.91■□□□□ 0.62
LSM6-207ENST00000515311 MED12Q93074 2177 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 TMEM72A0PK05 275 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 A8MVM7 634 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 DEAF1O75398 565 aaPredicted RBP18.91■□□□□ 0.62
LSM6-207ENST00000515311 GADD45GO95257 159 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 EDN3P14138 238 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 LHX2P50458 406 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 HMGA2P52926 109 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 ELF3P78545 371 aaPredicted RBP18.91■□□□□ 0.62
LSM6-207ENST00000515311 ATP6AP1Q15904 470 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 SYT14P1Q58G82 188 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 NKAIN4Q8IVV8 208 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 CPT1CQ8TCG5 803 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 STK35Q8TDR2 534 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 SARAFQ96BY9 339 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 DDIT4LQ96D03 193 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 TIMP4Q99727 224 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 FUZQ9BT04 418 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 REEP1Q9H902 201 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 S100A14Q9HCY8 104 aa18.91■□□□□ 0.62
LSM6-207ENST00000515311 CFAP46Q8IYW2 2715 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 IGKV1D-42A0A075B6H8 117 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 A0A1B0GTH9 108 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 CLOCKO15516 846 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 NPIPB7O75200 414 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 LDLRP01130 860 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 CPN1P15169 458 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 ZNF708P17019 499 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 CCNA2P20248 432 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 FUT4P22083 530 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 FASP25445 335 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 CLDN18P56856 261 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 FGD3Q5JSP0 725 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 DCST1Q5T197 706 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 TTC33Q6PID6 262 aaPredicted RBP18.9■□□□□ 0.62
LSM6-207ENST00000515311 GGNQ86UU5 652 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 CHERPQ8IWX8 916 aaKnown RBP18.9■□□□□ 0.62
LSM6-207ENST00000515311 SLC7A13Q8TCU3 470 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 TMEM255BQ8WV15 326 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 TMEM239Q8WW34 195 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 ACOT11Q8WXI4 607 aaPredicted RBP18.9■□□□□ 0.62
LSM6-207ENST00000515311 KLHL15Q96M94 604 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 POTEKPQ9BYX7 375 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 TMEM185BQ9H7F4 350 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 LYVE1Q9Y5Y7 322 aa18.9■□□□□ 0.62
LSM6-207ENST00000515311 SHANK1Q9Y566 2161 aa18.89■□□□□ 0.62
LSM6-207ENST00000515311 TRBV4-1A0A0J9YWV2 114 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 LIMS1P48059 325 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 MLLT10P55197 1068 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 HSF1Q00613 529 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 EGR4Q05215 589 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 ESPNLQ6ZVH7 1005 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 ATP6V1C2Q8NEY4 427 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 EPYCQ99645 322 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 OR11A1Q9GZK7 315 aa18.89■□□□□ 0.61
LSM6-207ENST00000515311 PRDM14Q9GZV8 571 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms