RNA–Protein interactions for RNA: ENST00000514665.1

USP53-209, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,233 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-209ENST00000514665 F5H5K5 113 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 OR2T1O43869 369 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 RAD51DO75771 328 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 AGTR1P30556 359 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 EVI2BP34910 448 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 EIF2DP41214 584 aaKnown RBP11.8□□□□□ -0.52
USP53-209ENST00000514665 CXADRP78310 365 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 SPOCK1Q08629 439 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 OR7A5Q15622 319 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 ACSM5Q6NUN0 579 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 SLC48A1Q6P1K1 146 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 SSX6Q7RTT6 188 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 ALPK2Q86TB3 2170 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 KIF18BQ86Y91 864 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 ZNF511Q8NB15 262 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 HOXB13Q92826 284 aaPredicted RBP11.8□□□□□ -0.52
USP53-209ENST00000514665 SLC35B4Q969S0 331 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 LYSMD1Q96S90 227 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 AIFM2Q9BRQ8 373 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 CRB3Q9BUF7 120 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 FGF22Q9HCT0 170 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 A4GALTQ9NPC4 353 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 COL16A1Q07092 1604 aaPredicted RBP11.8□□□□□ -0.52
USP53-209ENST00000514665 ZNF736B4DX44 427 aaPredicted RBP11.8□□□□□ -0.52
USP53-209ENST00000514665 H7C417 338 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 SYT14P1Q58G82 188 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 APOOLQ6UXV4 268 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 MBOAT2Q6ZWT7 520 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 GDF7Q7Z4P5 450 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 KCTD20Q7Z5Y7 419 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 PTOV1Q86YD1 416 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 CLDN22Q8N7P3 220 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 LMAN1LQ9HAT1 526 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 UBQLN4Q9NRR5 601 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 MAN2C1Q9NTJ4 1040 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 TESQ9UGI8 421 aaKnown RBP11.8□□□□□ -0.52
USP53-209ENST00000514665 RNF215Q9Y6U7 377 aa11.8□□□□□ -0.52
USP53-209ENST00000514665 CDHR4A6H8M9 788 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 FZD6O60353 706 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 MYOGP15173 224 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 OPRD1P41143 372 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 SLC19A1P41440 591 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 RPS5P46782 204 aaKnown RBP11.79□□□□□ -0.52
USP53-209ENST00000514665 PLP2Q04941 152 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 AQP6Q13520 282 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 GPR18Q14330 331 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 SIMC1Q8NDZ2 872 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 TM9SF4Q92544 642 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 TOMM40LQ969M1 308 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 OR5B2Q96R09 309 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ZNF442Q9H7R0 627 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 NT5DC2Q9H857 520 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 NOX3Q9HBY0 568 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 INIPQ9NRY2 104 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 HIF3AQ9Y2N7 669 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ZNF337Q9Y3M9 751 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ADAMTS7Q9UKP4 1686 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 A6NL46 340 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ZNF616Q08AN1 781 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 PDSS1Q5T2R2 415 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 CD163Q86VB7 1156 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ELOVL3Q9HB03 270 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 HHATLQ9HCP6 504 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 SLC7A11Q9UPY5 501 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 PIP5K1CO60331 668 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 FOXK2Q01167 660 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 SLC14A1Q13336 389 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 METRNLQ641Q3 311 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 TCTN3Q6NUS6 607 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 MFSD12Q6NUT3 480 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ADAMTSL4Q6UY14 1074 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 DPY19L4Q7Z388 723 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ADIPOR2Q86V24 386 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 UEVLDQ8IX04 471 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 ABHD4Q8TB40 342 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 NECAB3Q96P71 396 aaPredicted RBP11.79□□□□□ -0.52
USP53-209ENST00000514665 LMF2Q9BU23 707 aaKnown RBP11.79□□□□□ -0.52
USP53-209ENST00000514665 METTL17Q9H7H0 456 aaPredicted RBP11.79□□□□□ -0.52
USP53-209ENST00000514665 GALNT9Q9HCQ5 603 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 MEPEQ9NQ76 525 aaPredicted RBP11.79□□□□□ -0.52
USP53-209ENST00000514665 RABL2AQ9UBK7 228 aaPredicted RBP11.79□□□□□ -0.52
USP53-209ENST00000514665 RABL2BQ9UNT1 228 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 NTNG1Q9Y2I2 539 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
USP53-209ENST00000514665 LRIT2A6NDA9 550 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 MAN2B1O00754 1011 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 GPX5O75715 221 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 OR7A10O76100 309 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 HTR2AP28223 471 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 CRABP1P29762 137 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 RGS19P49795 217 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 EMP2P54851 167 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 SIRPAP78324 504 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 RIN1Q13671 783 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 NXNL2Q5VZ03 156 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 VASNQ6EMK4 673 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 LYPD4Q6UWN0 246 aa11.78□□□□□ -0.52
USP53-209ENST00000514665 ARSKQ6UWY0 536 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms