RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PRSS50Q9UI38 385 aa9.27□□□□□ -0.93
HMGXB3-205ENST00000514469 HDGFL3Q9Y3E1 203 aa9.27□□□□□ -0.93
HMGXB3-205ENST00000514469 NIPBLQ6KC79 2804 aaeCLIP9.27□□□□□ -0.93
HMGXB3-205ENST00000514469 MED13LQ71F56 2210 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 HS3ST1O14792 307 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 UBDO15205 165 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ARHGEF9O43307 516 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF208O43345 1280 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 CNOT4O95628 575 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 PLAUP00749 431 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 DBIP07108 87 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 NR2F1P10589 423 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 TFPIP10646 304 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ETFAP13804 333 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 PAX1P15863 534 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC1A3P43003 542 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 IDH2P48735 452 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 POLR2HP52434 150 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 POLR2JP52435 117 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 EPS8Q12929 822 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ITGADQ13349 1161 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 GNA13Q14344 377 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 TAB1Q15750 504 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 GTDC1Q4AE62 458 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 LIN52Q52LA3 116 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 EPGNQ6UW88 154 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 PRSS57Q6UWY2 283 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF836Q6ZNA1 936 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 BHLHA15Q7RTS1 189 aaPredicted RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 GALNT5Q7Z7M9 940 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 PIGXQ8TBF5 258 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 HSD17B8Q92506 261 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 VPS33AQ96AX1 596 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ZHX1-C8orf76Q96EF9 292 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 ITCHQ96J02 903 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 C18orf12Q96KH6 178 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 C7orf26Q96N11 449 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 USB1Q9BQ65 265 aaKnown RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 GSX2Q9BZM3 304 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 OR11A1Q9GZK7 315 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 GSX1Q9H4S2 264 aaPredicted RBP9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 RMND5AQ9H871 391 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 TPT1P8Q9HAU6 139 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 CALML5Q9NZT1 146 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 EMC3Q9P0I2 261 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 OSGIN1Q9UJX0 560 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 USH1CQ9Y6N9 552 aa9.26□□□□□ -0.93
HMGXB3-205ENST00000514469 TMED7-TICAM2A0A0A6YYA0 188 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM72A0PK05 275 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 FAM234BA2RU67 622 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 CDHR4A6H8M9 788 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 CFAP73A6NFT4 308 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 TMCC2O75069 709 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 LYZL6O75951 148 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ANP32DO95626 131 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 BCHEP06276 602 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 TFPTP0C1Z6 253 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 UQCRBP14927 111 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 IL7RP16871 459 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 HOXB9P17482 250 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 CRATP43155 626 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 PTH2RP49190 550 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 MAP2K6P52564 334 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 SLC16A1P53985 500 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 CRISP3P54108 245 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 DSTNP60981 165 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 H3F3AP84243 136 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 NCMAPQ5T1S8 102 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 RNF220Q5VTB9 566 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ADAM5Q6NVV9 412 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 BIVMQ86UB2 503 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 LSRQ86X29 649 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 P3H2Q8IVL5 708 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 PEX5LQ8IYB4 626 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF440Q8IYI8 595 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 MIER2Q8N344 545 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF611Q8N823 705 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 LILRB1Q8NHL6 650 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 GTF2H4Q92759 462 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF775Q96BV0 537 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 DDIT4LQ96D03 193 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 PERPQ96FX8 193 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 AURKBQ96GD4 344 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 POM121Q96HA1 1249 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 PAIP1Q9H074 479 aaKnown RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 THUMPD1Q9NXG2 353 aaKnown RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 TMEM181Q9P2C4 612 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 TRAPPC4Q9Y296 219 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 ZNF443Q9Y2A4 671 aaPredicted RBP9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 TMED7Q9Y3B3 224 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 RNF115Q9Y4L5 304 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 AKAP6Q13023 2319 aa9.25□□□□□ -0.93
HMGXB3-205ENST00000514469 C2CD3Q4AC94 2353 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 EIF1BO60739 113 aaKnown RBP9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 RAMP1O60894 148 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 TGDSO95455 350 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 THBS1P07996 1170 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 INHBBP09529 407 aa9.24□□□□□ -0.93
HMGXB3-205ENST00000514469 IMPDH2P12268 514 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms