RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 PCDHGA1Q9Y5H4 931 aa7.65□□□□□ -1.18
RNF4-220ENST00000513578 IGKV1D-42A0A075B6H8 117 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 IGLV3-32A0A0A0MS00 114 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 IGHV3-20A0A0C4DH32 117 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 A0A1W2PPW3 197 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TMEM200CA6NKL6 621 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ELOA3DA6NLF2 546 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 C9J4A7 227 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 J3QRE1 110 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ETV2O00321 342 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 IMPA2O14732 288 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 PRKNO60260 465 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 DKK1O94907 266 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 BCL10O95999 233 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 IGHA1P01876 353 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SCG5P05408 212 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ADRA2AP08913 450 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 RAB40ALP0C0E4 278 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SAGP10523 405 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 CCL4P13236 92 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 HK1P19367 917 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 FUT1P19526 365 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 MST1P26927 711 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 MSX1P28360 303 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 EVI2BP34910 448 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 LIPAP38571 399 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 HTR3AP46098 478 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TMED10P49755 219 aaKnown RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 RGS6P49758 472 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 RNF144AP50876 292 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 CDH11P55287 796 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 PRPS1P60891 318 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TUBA1BP68363 451 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 CRYZQ08257 329 aaKnown RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 ACSM1Q08AH1 577 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 C17orf67Q0P5P2 114 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 MLLT11Q13015 90 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 AQP6Q13520 282 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 CBFBQ13951 182 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 PCOLCEQ15113 449 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 EXT1Q16394 746 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 NDUFAF6Q330K2 333 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ELOA3BQ3SY89 546 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TIMM50Q3ZCQ8 353 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ARMCX4Q5H9R4 360 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 CLEC12AQ5QGZ9 265 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ZNF362Q5T0B9 420 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 DCAF12Q5T6F0 453 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ARHGAP11AQ6P4F7 1023 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TMEM81Q6P7N7 255 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 CBLN3Q6UW01 205 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 LYPD8Q6UX82 237 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 THSD4Q6ZMP0 1018 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 DPY19L2P2Q6ZN68 376 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 GDPGP1Q6ZNW5 385 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SHISA6Q6ZSJ9 500 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TUBA1AQ71U36 451 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 MEPCEQ7L2J0 689 aaKnown RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 CXXC5Q7LFL8 322 aaKnown RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 OAFQ86UD1 273 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 PRR22Q8IZ63 422 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ARMC10Q8N2F6 343 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 PSD4Q8NDX1 1056 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ELOA3Q8NG57 546 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 OR13C2Q8NGS9 318 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 OR2Y1Q8NGV0 311 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 OR6S1Q8NH40 331 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 M1APQ8TC57 530 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 NACC2Q96BF6 587 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TMCO6Q96DC7 493 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 RNFT2Q96EX2 444 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 LIN37Q96GY3 246 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 IMMP1LQ96LU5 166 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TNFRSF13CQ96RJ3 184 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 MGLLQ99685 303 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 CDC6Q99741 560 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 TBL1XR1Q9BZK7 514 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SPRY4Q9C004 299 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 B3GNT4Q9C0J1 378 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 NRSN2Q9GZP1 204 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ENKD1Q9H0I2 346 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SMOC1Q9H4F8 434 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 LIN28AQ9H9Z2 209 aaKnown RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 SIAEQ9HAT2 523 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 MCCC2Q9HCC0 563 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 HINT3Q9NQE9 182 aaKnown RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 WDR70Q9NW82 654 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SLC39A1Q9NY26 324 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 HAO2Q9NYQ3 351 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 H2AFY2Q9P0M6 372 aaPredicted RBP7.64□□□□□ -1.19
RNF4-220ENST00000513578 CHRNA9Q9UGM1 479 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 KLHL21Q9UJP4 597 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 HIF3AQ9Y2N7 669 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 SLC6A5Q9Y345 797 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 ZNF337Q9Y3M9 751 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 PCDHGA3Q9Y5H0 932 aa7.64□□□□□ -1.19
RNF4-220ENST00000513578 DCHS1Q96JQ0 3298 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 IGHV1-45A0A0A0MS14 117 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 TRBV11-1A0A0K0K1C0 115 aa7.63□□□□□ -1.19
RNF4-220ENST00000513578 CDC14CA4D256 554 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms