RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ZNF837Q96EG3 531 aaPredicted RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC47A1Q96FL8 570 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PYURFQ96I23 114 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 PRRC1Q96M27 445 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 RAB3IPQ96QF0 476 aaPredicted RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 NPAS1Q99742 590 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 WFDC6Q9BQY6 131 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 UGT2B28Q9BY64 529 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 C12orf10Q9HB07 376 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 TMEM27Q9HBJ8 222 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SERINC1Q9NRX5 453 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SELENONQ9NZV5 590 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SPRR3Q9UBC9 169 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 CHRNA9Q9UGM1 479 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SLC6A5Q9Y345 797 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SPIN1Q9Y657 262 aaPredicted RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 AP4B1Q9Y6B7 739 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 V9GYQ6 96 aa6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 SMG1Q96Q15 3661 aaKnown RBP6.85□□□□□ -1.31
HMGXB3-204ENST00000513318 A0A1B0GWA3 101 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 DHRS12A0PJE2 317 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 TRAPPC13A5PLN9 417 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ELOA3DA6NLF2 546 aaPredicted RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 CPSF4LA6NMK7 179 aaKnown RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 GJE1A6NN92 205 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 SHISA8B8ZZ34 492 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 NPIPA2E9PIF3 369 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 NPIPA3F8WFD2 350 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 CHP2O43745 196 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 TPST2O60704 377 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 WISP2O76076 250 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 OR5F1O95221 314 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 FABP3P05413 133 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 GPIP06744 558 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 TPOP07202 933 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 THRBP10828 461 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 PNMTP11086 282 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 UMPSP11172 480 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ABOP16442 354 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF708P17019 499 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ITGA2P17301 1181 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 POU3F2P20265 443 aaPredicted RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 FKBP2P26885 142 aaKnown RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 TACR3P29371 465 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 PTGS2P35354 604 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 MAGEA2P43356 314 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 LHX2P50458 406 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 VLDLRP98155 873 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 CHRNB3Q05901 458 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 C19orf57Q0VDD7 668 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 BCL2A1Q16548 175 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ELOA3BQ3SY89 546 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 FAM98BQ52LJ0 330 aaKnown RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 SYT14P1Q58G82 188 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ALG10BQ5I7T1 473 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 DCST1Q5T197 706 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 WLSQ5T9L3 541 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 C1orf146Q5VVC0 180 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ULK3Q6PHR2 472 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 C5orf46Q6UWT4 87 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ATG4DQ86TL0 474 aaPredicted RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 SPATA24Q86W54 205 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 RBM45Q8IUH3 476 aaKnown RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 CHERPQ8IWX8 916 aaKnown RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 GALNT11Q8NCW6 608 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ELOA3Q8NG57 546 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 OR5M1Q8NGP8 315 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 FAM57AQ8TBR7 257 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 UTP4Q969X6 686 aaKnown RBP6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF524Q96C55 264 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 AMBRA1Q9C0C7 1298 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 PRDM14Q9GZV8 571 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ADAM19Q9H013 955 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 MAGIXQ9H6Y5 334 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 CTPS2Q9NRF8 586 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 OSGIN1Q9UJX0 560 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ACAD8Q9UKU7 415 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ZNF337Q9Y3M9 751 aa6.84□□□□□ -1.31
HMGXB3-204ENST00000513318 ALPK2Q86TB3 2170 aa6.84□□□□□ -1.32
HMGXB3-204ENST00000513318 HCFC1P51610 2035 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 A0A087WUJ7 227 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 TMED7-TICAM2A0A0A6YYA0 188 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 TCRBV3S1A0A5B6 114 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 ERICH4A6NGS2 130 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 PRRG2O14669 202 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 ZNF208O43345 1280 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC19A2O60779 497 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 WDR1O75083 606 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 SEMA7AO75326 666 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 WISP1O95388 367 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 RAP2AP10114 183 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 GABRA1P14867 456 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 CPN1P15169 458 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 NQO1P15559 274 aaKnown RBP6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 RHCEP18577 417 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 CXCR1P25024 350 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 SLC7A1P30825 629 aa6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 CLK1P49759 484 aaKnown RBP6.83□□□□□ -1.32
HMGXB3-204ENST00000513318 CDH12P55289 794 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms