RNA–Protein interactions for RNA: ENST00000512979.1

TRIO-220, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 292 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-220ENST00000512979 CHMP6Q96FZ7 201 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 C16orf58Q96GQ5 468 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 ZC3HAV1LQ96H79 300 aaKnown RBP8.44□□□□□ -1.06
TRIO-220ENST00000512979 SH3YL1Q96HL8 342 aaPredicted RBP8.44□□□□□ -1.06
TRIO-220ENST00000512979 APOPT1Q96IL0 206 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 SNX22Q96L94 193 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 MECRQ9BV79 373 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 ROPN1BQ9BZX4 212 aaPredicted RBP8.44□□□□□ -1.06
TRIO-220ENST00000512979 ROPN1Q9HAT0 212 aaPredicted RBP8.44□□□□□ -1.06
TRIO-220ENST00000512979 SMURF2Q9HAU4 748 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 MED17Q9NVC6 651 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 NTMQ9P121 344 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 CLEC4AQ9UMR7 237 aa8.44□□□□□ -1.06
TRIO-220ENST00000512979 PCNX3Q9H6A9 2034 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 TMEM114B3SHH9 223 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 PIP5K1BO14986 540 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 PLGP00747 810 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 OPN1LWP04000 364 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 FGF4P08620 206 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 ZNF41P51814 821 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 GP2P55259 537 aaKnown RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 LASP1Q14847 261 aaKnown RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 GUSBP1Q15486 140 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 PLPPR5Q32ZL2 321 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 UGT3A2Q3SY77 523 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 ARL13AQ5H913 290 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 CCNJQ5T5M9 372 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 ZCCHC12Q6PEW1 402 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 CBLL1Q75N03 491 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 KRTAP1-3Q8IUG1 177 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 MISPQ8IVT2 679 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 GTPBP8Q8N3Z3 284 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 BANPQ8N9N5 519 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 OR10D3Q8NH80 312 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 FAM110BQ8TC76 370 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 AGR3Q8TD06 166 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 SLC7A6OSQ96CW6 309 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 MTERF3Q96E29 417 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 FAM120BQ96EK7 910 aaKnown RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 ADGRG7Q96K78 797 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 PPP3R2Q96LZ3 170 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 RNF145Q96MT1 663 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 DIRC2Q96SL1 478 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 NPAS1Q99742 590 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 KLHL4Q9C0H6 718 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 TMEM185BQ9H7F4 350 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 L2HGDHQ9H9P8 463 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 UBTD1Q9HAC8 227 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 UBQLN4Q9NRR5 601 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 SIRT3Q9NTG7 399 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 ZCCHC3Q9NUD5 404 aaKnown RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 FBXO34Q9NWN3 711 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 SLC17A7Q9P2U7 560 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 GRHPRQ9UBQ7 328 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 ZNF69Q9UC07 566 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 GIMAP2Q9UG22 337 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 MCTS1Q9ULC4 181 aaKnown RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 ZDHHC8Q9ULC8 765 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 SNX8Q9Y5X2 465 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 NAV3Q8IVL0 2385 aa8.43□□□□□ -1.06
TRIO-220ENST00000512979 HRNRQ86YZ3 2850 aaPredicted RBP8.43□□□□□ -1.06
TRIO-220ENST00000512979 VPS13CQ709C8 3753 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ZNF503-AS2A6NEH8 195 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 M0R3H8 397 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 TNFSF11O14788 317 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 SCAMP2O15127 329 aaKnown RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 CXCL13O43927 109 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 SMPD2O60906 423 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 PEX11AO75192 247 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 SPAG7O75391 227 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 SLU7O95391 586 aaKnown RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 SYNGR4O95473 234 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ABHD16AO95870 558 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 MT-ND5P03915 603 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 HMGN2P05204 90 aaKnown RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 ANXA2P07355 339 aaKnown RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 RAP2AP10114 183 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 LAMP1P11279 417 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ATP6V1C1P21283 382 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ME2P23368 584 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 LCN1P31025 176 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 RPL3P39023 403 aaKnown RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 CTBP2P56545 445 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 POU6F2P78424 691 aaPredicted RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 CD226Q15762 336 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ACKR1Q16570 336 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 CTU2Q2VPK5 515 aaKnown RBP8.42□□□□□ -1.06
TRIO-220ENST00000512979 ATP6AP1LQ52LC2 224 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 CPTPQ5TA50 214 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 SHEQ5VZ18 495 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 EMBQ6PCB8 327 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 LRIG3Q6UXM1 1119 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ZCCHC23Q6ZST2 131 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 TRABD2AQ86V40 505 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 P3H2Q8IVL5 708 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 ATG16L2Q8NAA4 619 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 OR7A2PQ8NGA2 310 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 OR6K3Q8NGY3 331 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 OR2V1Q8NHB1 315 aa8.42□□□□□ -1.06
TRIO-220ENST00000512979 B4GALNT2Q8NHY0 566 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms