RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 TRBV2A0A0J9YWF9 115 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 H3BSH0 61 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF593O00488 134 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 FGF17O60258 216 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 HRGP04196 525 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 POLR2CP19387 275 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 GJA4P35212 333 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 HTRA4P83105 476 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 CD276Q5ZPR3 534 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 TANGO2Q6ICL3 276 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 PXKQ7Z7A4 578 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 CEP76Q8TAP6 659 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ADAMTS14Q8WXS8 1223 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 TRAF4Q9BUZ4 470 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 SLC17A9Q9BYT1 436 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF350Q9GZX5 532 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 SRMSQ9H3Y6 488 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 METTL17Q9H7H0 456 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 GNG8Q9UK08 70 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 DAPP1Q9UN19 280 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 RCE1Q9Y256 329 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ADAM18Q9Y3Q7 739 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 POM121BA6NF01 834 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ACOD1A6NK06 481 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 LYPD3O95274 346 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 AGR2O95994 175 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 IGFALSP35858 605 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 GDNFP39905 211 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 NRG3P56975 720 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 RNF113BQ8IZP6 322 aaKnown RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 MS4A15Q8N5U1 240 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 NPFFR2Q9Y5X5 522 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 A0A1B0GWA3 101 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 CT62P0C5K7 136 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ARFIP1P53367 373 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 PLAURQ03405 335 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 SRSF5Q13243 272 aaKnown RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF267Q14586 743 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNF782Q6ZMW2 699 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 TMPRSS11FQ6ZWK6 438 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 OR51Q1Q8NH59 317 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 ZNRF4Q8WWF5 429 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 MSANTD3Q96H12 275 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 CLEC4MQ9H2X3 399 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 FLRT3Q9NZU0 649 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 PPIEQ9UNP9 301 aaKnown RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 IER3IP1Q9Y5U9 82 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 KIAA1549LQ6ZVL6 1849 aa8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 KIF26AQ9ULI4 1882 aaPredicted RBP8.54□□□□□ -1.04
LIMCH1-215ENST00000512632 B3GALT2O43825 422 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SC5DO75845 299 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 MPC2O95563 127 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 THBS1P07996 1170 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 MYOGP15173 224 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 HIST1H1CP16403 213 aaKnown RBP8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 EDNRAP25101 427 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 TAS2R43P59537 309 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SNTA1Q13424 505 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 EXOSC2Q13868 293 aaKnown RBP8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 FAAP20Q6NZ36 180 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 ENPP7Q6UWV6 458 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 CMTM4Q8IZR5 234 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 OR6K6Q8NGW6 343 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 TTC9Q92623 222 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SORCS2Q96PQ0 1159 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 APOOQ9BUR5 198 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 RBCK1Q9BYM8 510 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 TMEM168Q9H0V1 697 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SYNDIG1Q9H7V2 258 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 STARD5Q9NSY2 213 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 ST6GALNAC2Q9UJ37 374 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 C19orf53Q9UNZ5 99 aaPredicted RBP8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 H0Y8X5 98 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 TPOP07202 933 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 NGFRP08138 427 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 ACTR1BP42025 376 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SELENOPP49908 381 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 PRMT2P55345 433 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 ACTR1AP61163 376 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 NNATQ16517 81 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 TMEM255AQ5JRV8 349 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 RTL4Q6ZR62 310 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 Q6ZTK2 550 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 UBE2Q1Q7Z7E8 422 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 FTMTQ8N4E7 242 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 TSACCQ96A04 125 aaPredicted RBP8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 DLL4Q9NR61 685 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SPATA2Q9UM82 520 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 COLEC10Q9Y6Z7 277 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 A0A087WV48 116 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 PTP4A3O75365 173 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 FCER2P06734 321 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 RPL4P36578 427 aaKnown RBP8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 MMP15P51511 669 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 GBX2P52951 348 aaPredicted RBP8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 SIRPAP78324 504 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 KANSL1Q7Z3B3 1105 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 OR4N2Q8NGD1 307 aa8.53□□□□□ -1.04
LIMCH1-215ENST00000512632 C1QTNF6Q9BXI9 259 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms